RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 CXCL14O95715 111 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 FOSP01100 380 aaPredicted RBP11.85□□□□□ -0.51
COPB1-207ENST00000529866 VTNP04004 478 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 CALM1P0DP23 149 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 CALM2P0DP24 149 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 CALM3P0DP25 149 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 TMOD1P28289 359 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 METAP2P50579 478 aaKnown RBP eCLIP11.85□□□□□ -0.51
COPB1-207ENST00000529866 PUM1Q14671 1186 aaKnown RBP eCLIP11.85□□□□□ -0.51
COPB1-207ENST00000529866 ZC3H14Q6PJT7 736 aaKnown RBP11.85□□□□□ -0.51
COPB1-207ENST00000529866 PPFIBP1Q86W92 1011 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 ECHDC2Q86YB7 292 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 SIX5Q8N196 739 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 VPS52Q8N1B4 723 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 TMTC2Q8N394 836 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 SRBD1Q8N5C6 995 aaKnown RBP11.85□□□□□ -0.51
COPB1-207ENST00000529866 C12orf76Q8N812 135 aaPredicted RBP11.85□□□□□ -0.51
COPB1-207ENST00000529866 CYP2W1Q8TAV3 490 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 IGDCC4Q8TDY8 1250 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 BBXQ8WY36 941 aaPredicted RBP11.85□□□□□ -0.51
COPB1-207ENST00000529866 RMDN1Q96DB5 314 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 HINFPQ9BQA5 517 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 MTA3Q9BTC8 594 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 SFXN1Q9H9B4 322 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 LY9Q9HBG7 655 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 RNF19AQ9NV58 838 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 TCEAL9Q9UHQ7 104 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 AKT3Q9Y243 479 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 DOCK5Q9H7D0 1870 aa11.85□□□□□ -0.51
COPB1-207ENST00000529866 MED19A0JLT2 244 aaPredicted RBP11.84□□□□□ -0.51
COPB1-207ENST00000529866 CCDC69A6NI79 296 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 DDX39AO00148 427 aaKnown RBP11.84□□□□□ -0.51
COPB1-207ENST00000529866 MAGEB2O15479 319 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 ARP10275 920 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 ZNF76P36508 570 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 POLGP54098 1239 aaPredicted RBP11.84□□□□□ -0.51
COPB1-207ENST00000529866 ANTXR2P58335 489 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 PTH1RQ03431 593 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 NONOQ15233 471 aaKnown RBP eCLIP11.84□□□□□ -0.51
COPB1-207ENST00000529866 CLLU1OSQ5K130 101 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 ABHD15Q6UXT9 468 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 TMC5Q6UXY8 1006 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 CCDC60Q8IWA6 550 aaPredicted RBP11.84□□□□□ -0.51
COPB1-207ENST00000529866 MB21D2Q8IYB1 491 aaPredicted RBP11.84□□□□□ -0.51
COPB1-207ENST00000529866 SCLT1Q96NL6 688 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 ZBP1Q9H171 429 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 DACT1Q9NYF0 836 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 IGSF9Q9P2J2 1179 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 STK39Q9UEW8 545 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 IRAK3Q9Y616 596 aa11.84□□□□□ -0.51
COPB1-207ENST00000529866 GPR179Q6PRD1 2367 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 A0A0U1RQF3 1178 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 ZBTB42B2RXF5 422 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 STK25O00506 426 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 PI15O43692 258 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 ZC3H11AO75152 810 aaKnown RBP eCLIP11.83□□□□□ -0.52
COPB1-207ENST00000529866 CCNE2O96020 404 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 CTSAP10619 480 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 EPCAMP16422 314 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 NPR3P17342 541 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 EIF4BP23588 611 aaKnown RBP11.83□□□□□ -0.52
COPB1-207ENST00000529866 BCAR1P56945 870 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 AP3B2Q13367 1082 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 SWSAP1Q6NVH7 229 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 PPP1R18Q6NYC8 613 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 NIPA1Q7RTP0 329 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 GPR149Q86SP6 731 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 KIAA2013Q8IYS2 634 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
COPB1-207ENST00000529866 HELQQ8TDG4 1101 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 FAM167AQ96KS9 214 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 EMILIN2Q9BXX0 1053 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 ANO3Q9BYT9 981 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 KCNK12Q9HB15 430 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 OTOGLQ3ZCN5 2332 aa11.83□□□□□ -0.52
COPB1-207ENST00000529866 SPTBN2O15020 2390 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 hCG_1642624A0A1W2PR95 340 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 NT5C1B-RDH14C9J2C7 533 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 MEIS1O00470 390 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 CLCN3P51790 818 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 ADCY7P51828 1080 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 NAPAP54920 295 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 NLRP11P59045 1033 aaKnown RBP11.82□□□□□ -0.52
COPB1-207ENST00000529866 ELMSAN1Q6PJG2 1045 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 TMTC3Q6ZXV5 915 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 DDX53Q86TM3 631 aaKnown RBP11.82□□□□□ -0.52
COPB1-207ENST00000529866 STAMQ92783 540 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 TMEM87BQ96K49 555 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 GLT8D2Q9H1C3 349 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 WNT16Q9UBV4 365 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 SLC12A7Q9Y666 1083 aa11.82□□□□□ -0.52
COPB1-207ENST00000529866 FNDC1Q4ZHG4 1894 aaPredicted RBP11.82□□□□□ -0.52
COPB1-207ENST00000529866 DMXL1Q9Y485 3027 aa11.81□□□□□ -0.52
COPB1-207ENST00000529866 SH2B2O14492 632 aaPredicted RBP11.81□□□□□ -0.52
COPB1-207ENST00000529866 PRC1O43663 620 aa11.81□□□□□ -0.52
COPB1-207ENST00000529866 PSAPP07602 524 aa11.81□□□□□ -0.52
COPB1-207ENST00000529866 RXRAP19793 462 aa11.81□□□□□ -0.52
COPB1-207ENST00000529866 CHMLP26374 656 aa11.81□□□□□ -0.52
COPB1-207ENST00000529866 MCM5P33992 734 aa11.81□□□□□ -0.52
COPB1-207ENST00000529866 SREBF1P36956 1147 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms