RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MPHOSPH6Q99547 160 aaKnown RBP9.73□□□□□ -0.85
SSBP3-212ENST00000528930 WDR11Q9BZH6 1224 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 PXMP2Q9NR77 195 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 FAM217BQ9NTX9 383 aaPredicted RBP9.73□□□□□ -0.85
SSBP3-212ENST00000528930 RWDD3Q9Y3V2 267 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 NBEAQ8NFP9 2946 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 TTC3P53804 2025 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 C1QTNF9BB2RNN3 333 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 RBAK-RBAKDNI3L0D1 243 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 KINO60870 393 aaKnown RBP9.72□□□□□ -0.85
SSBP3-212ENST00000528930 ARIH2O95376 493 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 NR3C2P08235 984 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 C1QTNF9P0C862 333 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 CKBP12277 381 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 EIF2AK2P19525 551 aaKnown RBP9.72□□□□□ -0.85
SSBP3-212ENST00000528930 STXBP2Q15833 593 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 PTGISQ16647 500 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 ARHGEF16Q5VV41 709 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 SMYD5Q6GMV2 418 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 CCDC62Q6P9F0 684 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 PRR23BQ6ZRT6 265 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 Q6ZUG5 572 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 MICU3Q86XE3 530 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 FBXL16Q8N461 479 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 CCDC82Q8N4S0 544 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 VN1R2Q8NFZ6 395 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 NETO1Q8TDF5 533 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 SCFD2Q8WU76 684 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 RIN2Q8WYP3 895 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-212ENST00000528930 COPS5Q92905 334 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 CLP1Q92989 425 aaKnown RBP9.72□□□□□ -0.85
SSBP3-212ENST00000528930 RRP36Q96EU6 259 aaKnown RBP9.72□□□□□ -0.85
SSBP3-212ENST00000528930 BORCS6Q96GS4 357 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 JAKMIP1Q96N16 626 aaKnown RBP9.72□□□□□ -0.85
SSBP3-212ENST00000528930 PDCD2LQ9BRP1 358 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 AGXT2Q9BYV1 514 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 S1PR5Q9H228 398 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 NOD1Q9Y239 953 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 NR2E1Q9Y466 385 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 IGSF10Q6WRI0 2623 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 KIAA1217Q5T5P2 1943 aa9.72□□□□□ -0.85
SSBP3-212ENST00000528930 LOC400499M0QZD8 3231 aa9.71□□□□□ -0.85
SSBP3-212ENST00000528930 KLF18A0A0U1RQI7 1052 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 hCG_1642624A0A1W2PR95 340 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 SRRM3A6NNA2 597 aaPredicted RBP9.71□□□□□ -0.86
SSBP3-212ENST00000528930 C2CD4DB7Z1M9 353 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 GCOM1H8Y6P7 765 aaPredicted RBP9.71□□□□□ -0.86
SSBP3-212ENST00000528930 MEIS2O14770 477 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 NKRFO15226 690 aaKnown RBP eCLIP9.71□□□□□ -0.86
SSBP3-212ENST00000528930 SPTLC1O15269 473 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 ZBTB43O43298 467 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 EIF3JO75822 258 aaKnown RBP9.71□□□□□ -0.86
SSBP3-212ENST00000528930 POLR2MP0CAP2 368 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 TXNP10599 105 aaKnown RBP9.71□□□□□ -0.86
SSBP3-212ENST00000528930 RPS6KB1P23443 525 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 DNAJB1P25685 340 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 CDC27P30260 824 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 NRIP1P48552 1158 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 CPT1AP50416 773 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 PGM5Q15124 567 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 SYNE3Q6ZMZ3 975 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 SEPT14Q6ZU15 432 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 VSIG10LQ86VR7 867 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 SESTD1Q86VW0 696 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 IL31RAQ8NI17 732 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 USB1Q9BQ65 265 aaKnown RBP9.71□□□□□ -0.86
SSBP3-212ENST00000528930 RC3H2Q9HBD1 1191 aaKnown RBP9.71□□□□□ -0.86
SSBP3-212ENST00000528930 PARD6AQ9NPB6 346 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 DDX41Q9UJV9 622 aaKnown RBP9.71□□□□□ -0.86
SSBP3-212ENST00000528930 LOXHD1Q8IVV2 1947 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 CNTNAP5Q8WYK1 1306 aa9.71□□□□□ -0.86
SSBP3-212ENST00000528930 TMEM8BA6NDV4 472 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 A6NJR5 290 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 PIK3CDO00329 1044 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 DXOO77932 396 aaKnown RBP9.7□□□□□ -0.86
SSBP3-212ENST00000528930 ASGR2P07307 311 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 MYL3P08590 195 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 SP100P23497 879 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-212ENST00000528930 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
SSBP3-212ENST00000528930 RCAN1P53805 252 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 APOBRQ0VD83 1088 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 PPP2R5BQ15173 497 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 RTN1Q16799 776 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 LY6KQ17RY6 165 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 N4BP2L1Q5TBK1 243 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-212ENST00000528930 USP17L6PQ6QN14 398 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 BLOC1S2Q6QNY1 142 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 FCHSD1Q86WN1 690 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 FIBCD1Q8N539 461 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 OR6J1Q8NGC5 347 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 BRF1Q92994 677 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 P2RX5Q93086 422 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 PLVAPQ9BX97 442 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 ERVK-5Q9HDB9 667 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 RBM28Q9NW13 759 aaKnown RBP9.7□□□□□ -0.86
SSBP3-212ENST00000528930 SEC63Q9UGP8 760 aaKnown RBP9.7□□□□□ -0.86
SSBP3-212ENST00000528930 PLAGL2Q9UPG8 496 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 FRMPD4Q14CM0 1322 aa9.7□□□□□ -0.86
SSBP3-212ENST00000528930 DSPP15924 2871 aaKnown RBP9.7□□□□□ -0.86
SSBP3-212ENST00000528930 USP9XQ93008 2570 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms