RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ERICH1Q86X53 443 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 ERGIC2Q96RQ1 377 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.29■□□□□ 0.682e-8■□□□□ 11.3
LTBP3-210ENST00000528516 GNAT1P11488 350 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 GIMAP8Q8ND71 665 aaPredicted RBP19.28■□□□□ 0.68
LTBP3-210ENST00000528516 AK8Q96MA6 479 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 FMO2Q99518 471 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 SPATA31A5Q5VU36 1347 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 SPATA31A7Q8IWB4 1347 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 SRRM3A6NNA2 597 aaPredicted RBP19.28■□□□□ 0.68
LTBP3-210ENST00000528516 TTI1O43156 1089 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 GPSM2P81274 684 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 CCDC38Q502W7 563 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 NUCKS1Q9H1E3 243 aaKnown RBP19.28■□□□□ 0.68
LTBP3-210ENST00000528516 AZI2Q9H6S1 392 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 FAM205AQ6ZU69 1335 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 KLHL33A6NCF5 533 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 RASSF10A6NK89 507 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 KRT19P08727 400 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 KCNH2Q12809 1159 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 GALNT17Q6IS24 598 aa19.28■□□□□ 0.68
LTBP3-210ENST00000528516 RPUSD2Q8IZ73 545 aaKnown RBP19.28■□□□□ 0.68
LTBP3-210ENST00000528516 A8MUI8 341 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 MIS18BP1Q6P0N0 1132 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 IQCDQ96DY2 449 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 ANO3Q9BYT9 981 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 FAM129AQ9BZQ8 928 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 XIRP1Q702N8 1843 aaKnown RBP19.27■□□□□ 0.68
LTBP3-210ENST00000528516 PNPLA7Q6ZV29 1317 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 A0A1W2PQJ5 194 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 MYMKA6NI61 221 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 H0Y3Z8 333 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 ATF7P17544 494 aaPredicted RBP19.27■□□□□ 0.68
LTBP3-210ENST00000528516 CCND1P24385 295 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 CDK17Q00537 523 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 EEPD1Q7L9B9 569 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 ZNF572Q7Z3I7 529 aaPredicted RBP19.27■□□□□ 0.68
LTBP3-210ENST00000528516 ZNF668Q96K58 619 aaPredicted RBP19.27■□□□□ 0.68
LTBP3-210ENST00000528516 PACSIN1Q9BY11 444 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 ZFATQ9P243 1243 aa19.27■□□□□ 0.68
LTBP3-210ENST00000528516 PPEF1O14829 653 aaPredicted RBP19.27■□□□□ 0.67
LTBP3-210ENST00000528516 NTSR2O95665 410 aa19.27■□□□□ 0.67
LTBP3-210ENST00000528516 GBP1P32455 592 aa19.27■□□□□ 0.67
LTBP3-210ENST00000528516 PRPHP41219 470 aa19.27■□□□□ 0.67
LTBP3-210ENST00000528516 SESN3P58005 492 aa19.27■□□□□ 0.67
LTBP3-210ENST00000528516 SEMA3FQ13275 785 aa19.27■□□□□ 0.67
LTBP3-210ENST00000528516 CCDC6Q16204 474 aa19.27■□□□□ 0.67
LTBP3-210ENST00000528516 PKN1Q16512 942 aa19.27■□□□□ 0.67
LTBP3-210ENST00000528516 PPP1R14CQ8TAE6 165 aa19.27■□□□□ 0.67
LTBP3-210ENST00000528516 ZNF570Q96NI8 536 aa19.27■□□□□ 0.67
LTBP3-210ENST00000528516 MRC1P22897 1456 aa19.27■□□□□ 0.67
LTBP3-210ENST00000528516 KDM3BQ7LBC6 1761 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 RHOBTB3O94955 611 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 RANBP1P43487 201 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 IL17AQ16552 155 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 PDXDC1Q6P996 788 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 CRELD2Q6UXH1 353 aaPredicted RBP19.26■□□□□ 0.67
LTBP3-210ENST00000528516 UBL4BQ8N7F7 174 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 TRIM51Q9BSJ1 452 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 TRIM4Q9C037 500 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 PAPOLBQ9NRJ5 636 aaKnown RBP19.26■□□□□ 0.67
LTBP3-210ENST00000528516 COL18A1P39060 1754 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 PECAM1P16284 738 aaPredicted RBP19.26■□□□□ 0.67
LTBP3-210ENST00000528516 TRAF1Q13077 416 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 ASPRV1Q53RT3 343 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 ANKRD20A2Q5SQ80 823 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 ANKRD20A1Q5TYW2 823 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 ANKRD20A3Q5VUR7 823 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 ADGRF4Q8IZF3 695 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 UBE2TQ9NPD8 197 aaPredicted RBP19.26■□□□□ 0.67
LTBP3-210ENST00000528516 NARFQ9UHQ1 456 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 NKRFO15226 690 aaKnown RBP eCLIP19.26■□□□□ 0.67
LTBP3-210ENST00000528516 SUN1O94901 812 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 BCRP11274 1271 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 EIF2AK2P19525 551 aaKnown RBP19.26■□□□□ 0.67
LTBP3-210ENST00000528516 COASYQ13057 564 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 C11orf91Q3C1V1 193 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 CYP4F22Q6NT55 531 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 DCUN1D2Q6PH85 259 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 LINC00116Q8NCU8 138 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 CCDC77Q9BR77 488 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 PLA2G12BQ9BX93 195 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 G3BP2Q9UN86 482 aaKnown RBP19.26■□□□□ 0.67
LTBP3-210ENST00000528516 NOC2LQ9Y3T9 749 aaKnown RBP19.26■□□□□ 0.67
LTBP3-210ENST00000528516 CNTNAP5Q8WYK1 1306 aa19.26■□□□□ 0.67
LTBP3-210ENST00000528516 RPS6KA4O75676 772 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 AFPP02771 609 aaKnown RBP19.25■□□□□ 0.67
LTBP3-210ENST00000528516 PPP2R5DQ14738 602 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 WDR44Q5JSH3 913 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 NUGGCQ68CJ6 796 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 TRIM7Q9C029 511 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 NEUROG2Q9H2A3 272 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 EBF2Q9HAK2 575 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 SNX24Q9Y343 169 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 KDM3AQ9Y4C1 1321 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 FGGP02679 453 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 KRT15P19012 456 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 QRICH1Q2TAL8 776 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 HP1BP3Q5SSJ5 553 aaPredicted RBP19.25■□□□□ 0.67
LTBP3-210ENST00000528516 GPATCH4Q5T3I0 446 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms