RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 DUSP10Q9Y6W6 482 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 PHLDB1Q86UU1 1377 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 ST20-MTHFSA0A0A6YYL1 179 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 GOLGA8AA7E2F4 631 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 GOLGA8BA8MQT2 603 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 B4GALT3O60512 393 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 CCDC62Q6P9F0 684 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 RALYLQ86SE5 291 aaKnown RBP7.94□□□□□ -1.14
PCF11-202ENST00000528336 FERMT3Q86UX7 667 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 REXO1L1PQ8IX06 675 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 CMIPQ8IY22 773 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 LGI4Q8N135 537 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 PRPF38AQ8NAV1 312 aaKnown RBP7.94□□□□□ -1.14
PCF11-202ENST00000528336 KIAA1683Q9H0B3 1180 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 ADAM7Q9H2U9 754 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 INVSQ9Y283 1065 aa7.94□□□□□ -1.14
PCF11-202ENST00000528336 ABCC9O60706 1549 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 CNR2P34972 360 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 MEOX1P50221 254 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 SCAND1P57086 179 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 PCOLCEQ15113 449 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 DGKDQ16760 1214 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 CT83Q5H943 113 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 BCL6BQ8N143 479 aaPredicted RBP7.93□□□□□ -1.14
PCF11-202ENST00000528336 AHCYL2Q96HN2 611 aaKnown RBP7.93□□□□□ -1.14
PCF11-202ENST00000528336 DYDC2Q96IM9 177 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 NOL10Q9BSC4 688 aaKnown RBP7.93□□□□□ -1.14
PCF11-202ENST00000528336 FAM184BQ9ULE4 1060 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 USP18Q9UMW8 372 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 PPP2R3BQ9Y5P8 575 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 MYPNQ86TC9 1320 aa7.93□□□□□ -1.14
PCF11-202ENST00000528336 MAFGO15525 162 aa7.92□□□□□ -1.14
PCF11-202ENST00000528336 MAFO75444 373 aaPredicted RBP7.92□□□□□ -1.14
PCF11-202ENST00000528336 NCLP19338 710 aaKnown RBP7.92□□□□□ -1.14
PCF11-202ENST00000528336 GUCY2FP51841 1108 aa7.92□□□□□ -1.14
PCF11-202ENST00000528336 MANFP55145 182 aaKnown RBP7.92□□□□□ -1.14
PCF11-202ENST00000528336 C14orf119Q9NWQ9 140 aa7.92□□□□□ -1.14
PCF11-202ENST00000528336 DNAI1Q9UI46 699 aa7.92□□□□□ -1.14
PCF11-202ENST00000528336 DENND2AQ9ULE3 1009 aa7.92□□□□□ -1.14
PCF11-202ENST00000528336 A0A0A6YYJ9 748 aa7.91□□□□□ -1.14
PCF11-202ENST00000528336 OPHN1O60890 802 aa7.91□□□□□ -1.14
PCF11-202ENST00000528336 HOXA5P20719 270 aa7.91□□□□□ -1.14
PCF11-202ENST00000528336 MRE11P49959 708 aa7.91□□□□□ -1.14
PCF11-202ENST00000528336 FAPQ12884 760 aa7.91□□□□□ -1.14
PCF11-202ENST00000528336 TRIM68Q6AZZ1 485 aa7.91□□□□□ -1.14
PCF11-202ENST00000528336 BMP8AQ7Z5Y6 402 aa7.91□□□□□ -1.14
PCF11-202ENST00000528336 FRMD5Q7Z6J6 570 aa7.91□□□□□ -1.14
PCF11-202ENST00000528336 TGFBRAP1Q8WUH2 860 aa7.91□□□□□ -1.14
PCF11-202ENST00000528336 EAF2Q96CJ1 260 aaPredicted RBP7.91□□□□□ -1.14
PCF11-202ENST00000528336 PITHD1Q9GZP4 211 aaPredicted RBP7.91□□□□□ -1.14
PCF11-202ENST00000528336 SYNPO2Q9UMS6 1093 aa7.91□□□□□ -1.14
PCF11-202ENST00000528336 NOP58Q9Y2X3 529 aaKnown RBP7.91□□□□□ -1.14
PCF11-202ENST00000528336 hCG_2014768A0A024R1R8 64 aa7.9□□□□□ -1.14
PCF11-202ENST00000528336 LPLP06858 475 aa7.9□□□□□ -1.14
PCF11-202ENST00000528336 ADAM15Q13444 863 aa7.9□□□□□ -1.14
PCF11-202ENST00000528336 UBXN11Q5T124 520 aa7.9□□□□□ -1.14
PCF11-202ENST00000528336 CNTD1Q8N815 330 aa7.9□□□□□ -1.14
PCF11-202ENST00000528336 TRIM8Q9BZR9 551 aa7.9□□□□□ -1.14
PCF11-202ENST00000528336 PRDM12Q9H4Q4 367 aa7.9□□□□□ -1.14
PCF11-202ENST00000528336 JADE2Q9NQC1 790 aa7.9□□□□□ -1.14
PCF11-202ENST00000528336 EDARQ9UNE0 448 aa7.9□□□□□ -1.14
PCF11-202ENST00000528336 ZNF536O15090 1300 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 PRICKLE3O43900 615 aaPredicted RBP7.89□□□□□ -1.15
PCF11-202ENST00000528336 KATNA1O75449 491 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 PFKMP08237 780 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 ANAPC15P60006 121 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 ITKQ08881 620 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 UGT8Q16880 541 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 ZNF568Q3ZCX4 644 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 FBLN7Q53RD9 439 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 ZMAT1Q5H9K5 638 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 PITRM1Q5JRX3 1037 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 ARHGEF18Q6ZSZ5 1173 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 NECAB2Q7Z6G3 386 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 PLEKHH3Q7Z736 793 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 HIST1H2AHQ96KK5 128 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 WDR92Q96MX6 357 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 HIST1H2AJQ99878 128 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 BRINP2Q9C0B6 783 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 PUS7LQ9H0K6 701 aaKnown RBP7.89□□□□□ -1.15
PCF11-202ENST00000528336 POLR3BQ9NW08 1133 aaPredicted RBP7.89□□□□□ -1.15
PCF11-202ENST00000528336 PCDHB6Q9Y5E3 794 aa7.89□□□□□ -1.15
PCF11-202ENST00000528336 HNRNPLP14866 589 aaKnown RBP eCLIP7.88□□□□□ -1.15
PCF11-202ENST00000528336 PPP2CBP62714 309 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 PPP2CAP67775 309 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 PPARAQ07869 468 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 TBR1Q16650 682 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 LCE3BQ5TA77 95 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 AGBL4Q5VU57 503 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 KLHDC10Q6PID8 442 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 TTLL10Q6ZVT0 673 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 LMBR1Q8WVP7 490 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 GAB3Q8WWW8 586 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 ACAP3Q96P50 834 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 CCDC8Q9H0W5 538 aaPredicted RBP7.88□□□□□ -1.15
PCF11-202ENST00000528336 TMPRSS11EQ9UL52 423 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 NR2E1Q9Y466 385 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 NUMBLQ9Y6R0 609 aa7.88□□□□□ -1.15
PCF11-202ENST00000528336 CELA3BP08861 270 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 ENPP1P22413 925 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms