RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 MTERF2Q49AM1 385 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 CRIPAKQ8N1N5 446 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 LINC01465Q8N7H1 131 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 NEK9Q8TD19 979 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 SLC7A3Q8WY07 619 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 RSPH1Q8WYR4 309 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 HAS1Q92839 578 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 TNFRSF25Q93038 417 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 P2RX5Q93086 422 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 C8orf76Q96K31 380 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 SCLT1Q96NL6 688 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 ADAM2Q99965 735 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 C17orf80Q9BSJ5 609 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 ADAMTS10Q9H324 1103 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 FOXP1Q9H334 677 aaPredicted RBP10.76□□□□□ -0.69
CHD7-208ENST00000528280 CDHR5Q9HBB8 845 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 ATP6V0A4Q9HBG4 840 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 CHST12Q9NRB3 414 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 GJB4Q9NTQ9 266 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 DACT1Q9NYF0 836 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 VAV3Q9UKW4 847 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 ADGRA3Q8IWK6 1321 aa10.76□□□□□ -0.69
CHD7-208ENST00000528280 IGKV6-21A0A0C4DH24 114 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 CARNS1A5YM72 827 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 NEMFO60524 1076 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 JAK2O60674 1132 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 STBD1O95210 358 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 LARGE1O95461 756 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 EOMESO95936 686 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 GPC3P51654 580 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 CLCN3P51790 818 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 GNL2Q13823 731 aaKnown RBP10.75□□□□□ -0.69
CHD7-208ENST00000528280 UGCGQ16739 394 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 CSPP1Q1MSJ5 1256 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 TMEM266Q2M3C6 531 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 TIGD5Q53EQ6 642 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 ZNF410Q86VK4 478 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 CCDC83Q8IWF9 413 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 LRRC71Q8N4P6 559 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 BANK1Q8NDB2 785 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 TCP11Q8WWU5 503 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 NLRP7Q8WX94 980 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 GJA10Q969M2 543 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 OSMRQ99650 979 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 TMX1Q9H3N1 280 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 TTC12Q9H892 705 aaPredicted RBP10.75□□□□□ -0.69
CHD7-208ENST00000528280 CYP26B1Q9NR63 512 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 TMEM161AQ9NX61 479 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 SUCLA2Q9P2R7 463 aaPredicted RBP10.75□□□□□ -0.69
CHD7-208ENST00000528280 PCDHB12Q9Y5F1 795 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 TTC3P53804 2025 aa10.75□□□□□ -0.69
CHD7-208ENST00000528280 EVPLQ92817 2033 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 COL4A6Q14031 1691 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 C9IYK1 514 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 EML1O00423 815 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 DARSP14868 501 aaKnown RBP10.74□□□□□ -0.69
CHD7-208ENST00000528280 SFPQP23246 707 aaKnown RBP eCLIP10.74□□□□□ -0.69
CHD7-208ENST00000528280 CTNNB1P35222 781 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 TRAPPC10P48553 1259 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 POLGP54098 1239 aaPredicted RBP10.74□□□□□ -0.69
CHD7-208ENST00000528280 NCBP1Q09161 790 aaKnown RBP10.74□□□□□ -0.69
CHD7-208ENST00000528280 PUS10Q3MIT2 529 aaKnown RBP10.74□□□□□ -0.69
CHD7-208ENST00000528280 NCAPH2Q6IBW4 605 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 ANO5Q75V66 913 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 FAM228AQ86W67 206 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 POTEDQ86YR6 584 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 TPH2Q8IWU9 490 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 FBXO18Q8NFZ0 1043 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 GDPD5Q8WTR4 605 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 TMEM40Q8WWA1 233 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 PPP2R3CQ969Q6 453 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 CEP170P1Q96L14 293 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 KCNH6Q9H252 994 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 ANKEF1Q9NU02 776 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 DAXXQ9UER7 740 aaPredicted RBP10.74□□□□□ -0.69
CHD7-208ENST00000528280 NOL7Q9UMY1 257 aaKnown RBP10.74□□□□□ -0.69
CHD7-208ENST00000528280 STK24Q9Y6E0 443 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 BRWD1Q9NSI6 2320 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 PTPRSQ13332 1948 aa10.74□□□□□ -0.69
CHD7-208ENST00000528280 ZNF318Q5VUA4 2279 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 A0A0U1RQF3 1178 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 SLITRK3O94933 977 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 LYPLA2O95372 231 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 YWHABP31946 246 aaKnown RBP10.73□□□□□ -0.69
CHD7-208ENST00000528280 TXKP42681 527 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 UBE3AQ05086 875 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 DSC3Q14574 896 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 MXD4Q14582 209 aaPredicted RBP10.73□□□□□ -0.69
CHD7-208ENST00000528280 PCBP1Q15365 356 aaKnown RBP eCLIP10.73□□□□□ -0.69
CHD7-208ENST00000528280 XKR9Q5GH70 373 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 EARS2Q5JPH6 523 aaKnown RBP10.73□□□□□ -0.69
CHD7-208ENST00000528280 SPOUT1Q5T280 376 aaKnown RBP10.73□□□□□ -0.69
CHD7-208ENST00000528280 PDE12Q6L8Q7 609 aaKnown RBP10.73□□□□□ -0.69
CHD7-208ENST00000528280 SRGAP1Q7Z6B7 1085 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 RHPN2Q8IUC4 686 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 ABI1Q8IZP0 508 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 ERMNQ8TAM6 284 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 PSPC1Q8WXF1 523 aaKnown RBP10.73□□□□□ -0.69
CHD7-208ENST00000528280 LINC01599Q8WXQ3 324 aa10.73□□□□□ -0.69
CHD7-208ENST00000528280 MTMR9Q96QG7 549 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms