RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ZSWIM4Q9H7M6 989 aa17.39■□□□□ 0.37
CAPN1-213ENST00000527897 C1orf112Q9NSG2 853 aa17.39■□□□□ 0.37
CAPN1-213ENST00000527897 A0A087WZ62 844 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 ZBTB39O15060 712 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 MAFO75444 373 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 DARSP14868 501 aaKnown RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 ZSCAN20P17040 1043 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 YWHABP31946 246 aaKnown RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 TFF2Q03403 129 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 ZNF174Q15697 407 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 XKR9Q5GH70 373 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 SPOUT1Q5T280 376 aaKnown RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 SLC24A5Q71RS6 500 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 OTUD6AQ7L8S5 288 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 KSR1Q8IVT5 923 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 RNF169Q8NCN4 708 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 IL27Q8NEV9 243 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 ZNF689Q96CS4 500 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 CCDC43Q96MW1 224 aaKnown RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 CEP89Q96ST8 783 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 JPH2Q9BR39 696 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 FDXACB1Q9BRP7 624 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 GCOM2Q9BZD3 368 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 TMEM60Q9H2L4 133 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 FOXP1Q9H334 677 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 RC3H2Q9HBD1 1191 aaKnown RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 RGS18Q9NS28 235 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 MRPL42Q9Y6G3 142 aaKnown RBP17.38■□□□□ 0.37
CAPN1-213ENST00000527897 COL4A6Q14031 1691 aa17.38■□□□□ 0.37
CAPN1-213ENST00000527897 POTEMA6NI47 508 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 TBKBP1A7MCY6 615 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 H3BNC9 293 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 CD2BP2O95400 341 aaKnown RBP17.37■□□□□ 0.37
CAPN1-213ENST00000527897 BMPR1AP36894 532 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 MRPS5P82675 430 aaKnown RBP17.37■□□□□ 0.37
CAPN1-213ENST00000527897 PTPROQ16827 1216 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 TJAP1Q5JTD0 557 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 C4orf19Q8IY42 314 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 CMTR2Q8IYT2 770 aaKnown RBP17.37■□□□□ 0.37
CAPN1-213ENST00000527897 ZNF710Q8N1W2 664 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 ATXN2LQ8WWM7 1075 aaKnown RBP17.37■□□□□ 0.37
CAPN1-213ENST00000527897 TMEM143Q96AN5 459 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 LMCD1Q9NZU5 365 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 RWDD3Q9Y3V2 267 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 KIAA1671Q9BY89 1806 aa17.37■□□□□ 0.37
CAPN1-213ENST00000527897 ARID2Q68CP9 1835 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 IGKV6-21A0A0C4DH24 114 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 C9IYK1 514 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 FGFR1P11362 822 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 TTC38Q5R3I4 469 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 FAM102BQ5T8I3 360 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 NOSTRINQ8IVI9 506 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 MRPL38Q96DV4 380 aaKnown RBP17.36■□□□□ 0.37
CAPN1-213ENST00000527897 TMX3Q96JJ7 454 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 TBC1D32Q96NH3 1257 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 ASB2Q96Q27 587 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 MTMR9Q96QG7 549 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 C11orf84Q9BUA3 381 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-213ENST00000527897 ATP6V0A4Q9HBG4 840 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-213ENST00000527897 NOL7Q9UMY1 257 aaKnown RBP17.36■□□□□ 0.37
CAPN1-213ENST00000527897 KIF3AQ9Y496 699 aa17.36■□□□□ 0.37
CAPN1-213ENST00000527897 FNDC1Q4ZHG4 1894 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-213ENST00000527897 A0A087WWV3 80 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 SLITRK3O94933 977 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 SRGAP2CP0DJJ0 459 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 RFC5P40937 340 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 TECP42680 631 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 CDC42EP1Q00587 391 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 DSC3Q14574 896 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 NBR1Q14596 966 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 EMC2Q15006 297 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 MCTP1Q6DN14 999 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 EXOC8Q8IYI6 725 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 CRIPAKQ8N1N5 446 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 SYMPKQ92797 1274 aaKnown RBP17.35■□□□□ 0.37
CAPN1-213ENST00000527897 CLP1Q92989 425 aaKnown RBP17.35■□□□□ 0.37
CAPN1-213ENST00000527897 COL4A3BPQ9Y5P4 624 aa17.35■□□□□ 0.37
CAPN1-213ENST00000527897 GRM6O15303 877 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 RB1P06400 928 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 OR52Z1P0C646 297 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 LINC00271P0C7V0 271 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 SFPQP23246 707 aaKnown RBP eCLIP17.34■□□□□ 0.37
CAPN1-213ENST00000527897 EP400NLQ6ZTU2 488 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 CATSPER4Q7RTX7 472 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 ZNF410Q86VK4 478 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 NEK9Q8TD19 979 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 PIGOQ8TEQ8 1089 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 PRPF31Q8WWY3 499 aaKnown RBP17.34■□□□□ 0.37
CAPN1-213ENST00000527897 PSPC1Q8WXF1 523 aaKnown RBP17.34■□□□□ 0.37
CAPN1-213ENST00000527897 HLA-CQ95604 372 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 MTRQ99707 1265 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 INO80BQ9C086 356 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-213ENST00000527897 DHX33Q9H6R0 707 aaKnown RBP17.34■□□□□ 0.37
CAPN1-213ENST00000527897 ALG13Q9NP73 1137 aaKnown RBP17.34■□□□□ 0.37
CAPN1-213ENST00000527897 SPTBN5Q9NRC6 3674 aaKnown RBP17.34■□□□□ 0.37
CAPN1-213ENST00000527897 TMEM161AQ9NX61 479 aa17.34■□□□□ 0.37
CAPN1-213ENST00000527897 TCF20Q9UGU0 1960 aaKnown RBP17.34■□□□□ 0.37
CAPN1-213ENST00000527897 C5orf67F2Z3F1 127 aa17.33■□□□□ 0.36
CAPN1-213ENST00000527897 GJB2P29033 226 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms