RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SYTL5Q8TDW5 730 aaPredicted RBP16.29■□□□□ 0.2
USP47-207ENST00000527733 TMEM143Q96AN5 459 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 SUCLA2Q9P2R7 463 aaPredicted RBP16.29■□□□□ 0.2
USP47-207ENST00000527733 CDC23Q9UJX2 597 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 LRRC37A3O60309 1634 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 ERICH4A6NGS2 130 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
USP47-207ENST00000527733 FAM169AQ9Y6X4 670 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 SMIM23A6NLE4 172 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 MAPK4P31152 587 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 RFC5P40937 340 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 PLA2G4FQ68DD2 849 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 HPSEQ9Y251 543 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 PCDHA13Q9Y5I0 950 aa16.29■□□□□ 0.2
USP47-207ENST00000527733 TBC1D12O60347 775 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 FAM149B1Q96BN6 582 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 PDCD2LQ9BRP1 358 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 LIMA1Q9UHB6 759 aaKnown RBP16.28■□□□□ 0.2
USP47-207ENST00000527733 C6orf222P0C671 652 aaPredicted RBP16.28■□□□□ 0.2
USP47-207ENST00000527733 EDRF1Q3B7T1 1238 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 SND1Q7KZF4 910 aaKnown RBP eCLIP16.28■□□□□ 0.2
USP47-207ENST00000527733 SYT2Q8N9I0 419 aaPredicted RBP16.28■□□□□ 0.2
USP47-207ENST00000527733 RBAKQ9NYW8 714 aaPredicted RBP16.28■□□□□ 0.2
USP47-207ENST00000527733 PRKAG2Q9UGJ0 569 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 VWA5AO00534 786 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 TRIM49P0CI25 452 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 TRIM49CP0CI26 452 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 ARP10275 920 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 GPC3P51654 580 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 HERVK_113P62684 666 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 CDC42EP1Q00587 391 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 BFSP1Q12934 665 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 LAMC2Q13753 1193 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 EMC2Q15006 297 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 SPATC1LQ9H0A9 340 aa16.28■□□□□ 0.2
USP47-207ENST00000527733 LRRC53A6NM62 1247 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 PTPRAP18433 802 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 ACTR2P61160 394 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 IFRD2Q12894 506 aaPredicted RBP16.27■□□□□ 0.2
USP47-207ENST00000527733 CCDC89Q8N998 374 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 UNC45AQ9H3U1 944 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 ERAP1Q9NZ08 941 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 GOLGA8SH3BPF8 625 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 PRKCBP05771 671 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 NPEPPSP55786 919 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 PPATQ06203 517 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 GRB10Q13322 594 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 Q4G0T1 1027 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 DNAJC24Q6P3W2 148 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 CDCA5Q96FF9 252 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 EDEM3Q9BZQ6 932 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 TTC26A0AVF1 554 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 ENC1O14682 589 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 NDC80O14777 642 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 IFNB1P01574 187 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 FGRP09769 529 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 MUTP22033 750 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 OAZ1P54368 228 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 ZNF699Q32M78 642 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 PCNX4Q63HM2 1172 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 MAP7D3Q8IWC1 876 aa16.27■□□□□ 0.2
USP47-207ENST00000527733 SLC16A3O15427 465 aaKnown RBP16.27■□□□□ 0.19
USP47-207ENST00000527733 HBP1O60381 514 aa16.27■□□□□ 0.19
USP47-207ENST00000527733 TRIM50Q86XT4 487 aa16.27■□□□□ 0.19
USP47-207ENST00000527733 SREK1Q8WXA9 508 aaKnown RBP16.27■□□□□ 0.19
USP47-207ENST00000527733 PDLIM2Q96JY6 352 aa16.27■□□□□ 0.19
USP47-207ENST00000527733 HEXIM2Q96MH2 286 aaKnown RBP16.27■□□□□ 0.19
USP47-207ENST00000527733 KATNAL1Q9BW62 490 aa16.27■□□□□ 0.19
USP47-207ENST00000527733 RRAGCQ9HB90 399 aa16.27■□□□□ 0.19
USP47-207ENST00000527733 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.19
USP47-207ENST00000527733 ABL1P00519 1130 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 DSTYKQ6XUX3 929 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 ARMCX2Q7L311 632 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 NSMCE1Q8WV22 266 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 PHRF1Q9P1Y6 1649 aaKnown RBP16.26■□□□□ 0.19
USP47-207ENST00000527733 PABPN1LA6NDY0 278 aaKnown RBP16.26■□□□□ 0.19
USP47-207ENST00000527733 EFCAB8A8MWE9 144 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 CYP11B2P19099 503 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 BEST2Q8NFU1 509 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 FAM107BQ9H098 131 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 IFT122Q9HBG6 1241 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 EMSYQ7Z589 1322 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 ASAP2O43150 1006 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 PLEKHH3Q7Z736 793 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 PXMP2Q9NR77 195 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 JRKLQ9Y4A0 524 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 RFX1P22670 979 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 AP3M2P53677 418 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 MICALCLQ6ZW33 695 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 OR6B3Q8NGW1 331 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 INTS2Q9H0H0 1204 aaKnown RBP16.26■□□□□ 0.19
USP47-207ENST00000527733 LRRC4Q9HBW1 653 aa16.26■□□□□ 0.19
USP47-207ENST00000527733 MED24O75448 989 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 KYAT1Q16773 422 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 DUOXA2Q1HG44 320 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 KIAA1841Q6NSI8 718 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 FBXL13Q8NEE6 735 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 RSAD2Q8WXG1 361 aa16.25■□□□□ 0.19
USP47-207ENST00000527733 PAIP2Q9BPZ3 127 aaKnown RBP16.25■□□□□ 0.19
USP47-207ENST00000527733 HSPBP1Q9NZL4 362 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms