RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 HABP4Q5JVS0 413 aaKnown RBP4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 DPP8Q6V1X1 898 aaPredicted RBP4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 TMPRSS6Q8IU80 811 aa4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 KRT222Q8N1A0 295 aa4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 NME8Q8N427 588 aa4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 C12orf65Q9H3J6 166 aaKnown RBP4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 CHMP5Q9NZZ3 219 aa4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 CTNNA3Q9UI47 895 aa4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 CADPSQ9ULU8 1353 aa4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 MYOM3Q5VTT5 1437 aa4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 ERICH3Q5RHP9 1530 aa4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 CTTNBP2Q8WZ74 1663 aa4.35□□□□□ -1.71
CLNS1A-209ENST00000527299 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 FOXN1O15353 648 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 CCP110O43303 1012 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 PEX11BO96011 259 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 SETSIPP0DME0 302 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 U2AF2P26368 475 aaKnown RBP eCLIP4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 ABCD1P33897 745 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 MSX2P35548 267 aaPredicted RBP4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 HNRNPH2P55795 449 aaKnown RBP4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 RRP1P56182 461 aaKnown RBP4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 CCT2P78371 535 aaKnown RBP4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 MAP4K2Q12851 820 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 PPP2R5AQ15172 486 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 RABEP1Q15276 862 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 GAS2L3Q86XJ1 694 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 SEC16BQ96JE7 1060 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 TTPALQ9BTX7 342 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 ZDHHC5Q9C0B5 715 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 GZF1Q9H116 711 aaPredicted RBP4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 RANBP17Q9H2T7 1088 aaKnown RBP4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 SLC2A4RGQ9NR83 387 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 DIAPH3Q9NSV4 1193 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 ETAA1Q9NY74 926 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 CWC15Q9P013 229 aaKnown RBP4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 PUF60Q9UHX1 559 aaKnown RBP4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 UHRF1BP1LA0JNW5 1464 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 ABCA5Q8WWZ7 1642 aa4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 POLR1AO95602 1720 aaPredicted RBP4.34□□□□□ -1.71
CLNS1A-209ENST00000527299 NLRP1Q9C000 1473 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 IL16Q14005 1332 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 NKRFO15226 690 aaKnown RBP eCLIP4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 SUSD5O60279 629 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 ZRANB2O95218 330 aaKnown RBP eCLIP4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 COL6A2P12110 1019 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 MAP2K2P36507 400 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 ADCY2Q08462 1091 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 SPIRE1Q08AE8 756 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 TRAF1Q13077 416 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 CCDC142Q17RM4 750 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 TTC31Q49AM3 519 aaPredicted RBP4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 C6orf15Q6UXA7 325 aaPredicted RBP4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 RSPO2Q6UXX9 243 aaPredicted RBP4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 KCTD1Q719H9 257 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 MORC1Q86VD1 984 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 METTL16Q86W50 562 aaKnown RBP4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 TXLNBQ8N3L3 684 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 ANKRD20A12PQ8NF67 263 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 SLC39A2Q9NP94 309 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 PARPBPQ9NWS1 579 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 POLKQ9UBT6 870 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 DSEQ9UL01 958 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 STRIP2Q9ULQ0 834 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 SYNPO2Q9UMS6 1093 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 GIT1Q9Y2X7 761 aa4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 REXO2Q9Y3B8 237 aaKnown RBP4.33□□□□□ -1.72
CLNS1A-209ENST00000527299 CNTLNQ9NXG0 1405 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 ZMYM3Q14202 1370 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 DHX29Q7Z478 1369 aaKnown RBP4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 USP19O94966 1318 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 KDM2BQ8NHM5 1336 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 SYNRGQ9UMZ2 1314 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 MYO1CO00159 1063 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 BMP5P22003 454 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 ADRA1BP35368 520 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 GRIA2P42262 883 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 RBM5P52756 815 aaKnown RBP eCLIP4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 DBPQ10586 325 aaPredicted RBP4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 AMOTQ4VCS5 1084 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 HSP90B2PQ58FF3 399 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 LARP4Q71RC2 724 aaKnown RBP eCLIP4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 ADGRE4PQ86SQ3 457 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 FAM178BQ8IXR5 827 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 GPR135Q8IZ08 494 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 RPUSD2Q8IZ73 545 aaKnown RBP4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 LSM14AQ8ND56 463 aaKnown RBP4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 STAG1Q8WVM7 1258 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 ZNF428Q96B54 188 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 DRC1Q96MC2 740 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 MMTAG2Q9BU76 263 aaKnown RBP4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 MAF1Q9H063 256 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 SLKQ9H2G2 1235 aaPredicted RBP4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 NELFAQ9H3P2 528 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 TOMM22Q9NS69 142 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 SPTLC3Q9NUV7 552 aa4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 HECAQ9UBI9 543 aaPredicted RBP4.32□□□□□ -1.72
CLNS1A-209ENST00000527299 CCDC88BA6NC98 1476 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 FHAD1B1AJZ9 1412 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms