RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 CCDC196A0A1B0GTZ2 297 aa18.23■□□□□ 0.51
PTPRU-210ENST00000527027 AVPR2P30518 371 aa18.23■□□□□ 0.51
PTPRU-210ENST00000527027 ECHDC2Q86YB7 292 aa18.23■□□□□ 0.51
PTPRU-210ENST00000527027 RASEFQ8IZ41 740 aa18.23■□□□□ 0.51
PTPRU-210ENST00000527027 LRRC43Q8N309 656 aa18.23■□□□□ 0.51
PTPRU-210ENST00000527027 LINC01465Q8N7H1 131 aa18.23■□□□□ 0.51
PTPRU-210ENST00000527027 FAM167AQ96KS9 214 aa18.23■□□□□ 0.51
PTPRU-210ENST00000527027 C6orf50Q9HD87 102 aa18.23■□□□□ 0.51
PTPRU-210ENST00000527027 NRBP2Q9NSY0 501 aa18.23■□□□□ 0.51
PTPRU-210ENST00000527027 SAMM50Q9Y512 469 aa18.23■□□□□ 0.51
PTPRU-210ENST00000527027 ZFHX2Q9C0A1 2572 aaPredicted RBP18.23■□□□□ 0.51
PTPRU-210ENST00000527027 EVPLQ92817 2033 aa18.22■□□□□ 0.51
PTPRU-210ENST00000527027 CACNA1HO95180 2353 aa18.22■□□□□ 0.51
PTPRU-210ENST00000527027 ADAMTS3O15072 1205 aa18.22■□□□□ 0.51
PTPRU-210ENST00000527027 CIITAP33076 1130 aa18.22■□□□□ 0.51
PTPRU-210ENST00000527027 PBX3P40426 434 aa18.22■□□□□ 0.51
PTPRU-210ENST00000527027 KRT32Q14532 448 aa18.22■□□□□ 0.51
PTPRU-210ENST00000527027 PRR16Q569H4 304 aa18.22■□□□□ 0.51
PTPRU-210ENST00000527027 ZBTB33Q86T24 672 aa18.22■□□□□ 0.51
PTPRU-210ENST00000527027 REXO1Q8N1G1 1221 aaKnown RBP18.22■□□□□ 0.51
PTPRU-210ENST00000527027 MRPL43Q8N983 215 aaKnown RBP18.22■□□□□ 0.51
PTPRU-210ENST00000527027 CCDC12Q8WUD4 166 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-210ENST00000527027 NAP1L2Q9ULW6 460 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-210ENST00000527027 A0A0U1RQF3 1178 aa18.21■□□□□ 0.51
PTPRU-210ENST00000527027 EOMESO95936 686 aa18.21■□□□□ 0.51
PTPRU-210ENST00000527027 HMGB1P09429 215 aaKnown RBP18.21■□□□□ 0.51
PTPRU-210ENST00000527027 GNA11P29992 359 aa18.21■□□□□ 0.51
PTPRU-210ENST00000527027 METAP2P50579 478 aaKnown RBP eCLIP18.21■□□□□ 0.51
PTPRU-210ENST00000527027 VCPP55072 806 aaKnown RBP18.21■□□□□ 0.51
PTPRU-210ENST00000527027 SMC1AQ14683 1233 aaKnown RBP18.21■□□□□ 0.51
PTPRU-210ENST00000527027 TPRNQ4KMQ1 711 aa18.21■□□□□ 0.51
PTPRU-210ENST00000527027 LRRC71Q8N4P6 559 aa18.21■□□□□ 0.51
PTPRU-210ENST00000527027 RNF169Q8NCN4 708 aa18.21■□□□□ 0.51
PTPRU-210ENST00000527027 CASP10Q92851 521 aa18.21■□□□□ 0.51
PTPRU-210ENST00000527027 IRF2BPLQ9H1B7 796 aa18.21■□□□□ 0.51
PTPRU-210ENST00000527027 NR2E1Q9Y466 385 aa18.21■□□□□ 0.51
PTPRU-210ENST00000527027 WDR64B1ANS9 1081 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 ST18O60284 1047 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 ZNF862O60290 1169 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 OATP04181 439 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 DARSP14868 501 aaKnown RBP18.2■□□□□ 0.5
PTPRU-210ENST00000527027 FGD1P98174 961 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 ITIH3Q06033 890 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 BMP2KLQ5H9B9 411 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 CLLU1OSQ5K130 101 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 CES5AQ6NT32 575 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 ZNF598Q86UK7 904 aaKnown RBP18.2■□□□□ 0.5
PTPRU-210ENST00000527027 SLC39A11Q8N1S5 342 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 LENG9Q96B70 501 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 ZNF668Q96K58 619 aaPredicted RBP18.2■□□□□ 0.5
PTPRU-210ENST00000527027 RIPOR3Q96MK2 946 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 ADAM7Q9H2U9 754 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 DISC1Q9NRI5 854 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 HCFC2Q9Y5Z7 792 aa18.2■□□□□ 0.5
PTPRU-210ENST00000527027 C2orf71A6NGG8 1288 aa18.19■□□□□ 0.5
PTPRU-210ENST00000527027 PRPF3O43395 683 aaKnown RBP18.19■□□□□ 0.5
PTPRU-210ENST00000527027 SP100P23497 879 aaPredicted RBP18.19■□□□□ 0.5
PTPRU-210ENST00000527027 ALDH7A1P49419 539 aaKnown RBP18.19■□□□□ 0.5
PTPRU-210ENST00000527027 GPC3P51654 580 aa18.19■□□□□ 0.5
PTPRU-210ENST00000527027 BICD2Q8TD16 824 aa18.19■□□□□ 0.5
PTPRU-210ENST00000527027 HELQQ8TDG4 1101 aa18.19■□□□□ 0.5
PTPRU-210ENST00000527027 NECTIN4Q96NY8 510 aa18.19■□□□□ 0.5
PTPRU-210ENST00000527027 TSHZ2Q9NRE2 1034 aa18.19■□□□□ 0.5
PTPRU-210ENST00000527027 CFAP54Q96N23 3096 aa18.18■□□□□ 0.5
PTPRU-210ENST00000527027 MSH4O15457 936 aa18.18■□□□□ 0.5
PTPRU-210ENST00000527027 CLASP2O75122 1294 aaKnown RBP18.18■□□□□ 0.5
PTPRU-210ENST00000527027 CXCL14O95715 111 aa18.18■□□□□ 0.5
PTPRU-210ENST00000527027 NUBP1P53384 320 aa18.18■□□□□ 0.5
PTPRU-210ENST00000527027 PRKCEQ02156 737 aa18.18■□□□□ 0.5
PTPRU-210ENST00000527027 BMS1Q14692 1282 aaKnown RBP18.18■□□□□ 0.5
PTPRU-210ENST00000527027 UBALD2Q8IYN6 164 aa18.18■□□□□ 0.5
PTPRU-210ENST00000527027 KREMEN2Q8NCW0 462 aa18.18■□□□□ 0.5
PTPRU-210ENST00000527027 ATOH1Q92858 354 aaPredicted RBP18.18■□□□□ 0.5
PTPRU-210ENST00000527027 SCLT1Q96NL6 688 aa18.18■□□□□ 0.5
PTPRU-210ENST00000527027 RIT2Q99578 217 aa18.18■□□□□ 0.5
PTPRU-210ENST00000527027 MRPL9Q9BYD2 267 aaKnown RBP18.18■□□□□ 0.5
PTPRU-210ENST00000527027 DACT1Q9NYF0 836 aa18.18■□□□□ 0.5
PTPRU-210ENST00000527027 CDH22Q9UJ99 828 aa18.18■□□□□ 0.5
PTPRU-210ENST00000527027 PDGFBP01127 241 aaPredicted RBP18.17■□□□□ 0.5
PTPRU-210ENST00000527027 FGFR4P22455 802 aa18.17■□□□□ 0.5
PTPRU-210ENST00000527027 SFNP31947 248 aa18.17■□□□□ 0.5
PTPRU-210ENST00000527027 BCAR1P56945 870 aa18.17■□□□□ 0.5
PTPRU-210ENST00000527027 CDC42EP1Q00587 391 aa18.17■□□□□ 0.5
PTPRU-210ENST00000527027 AKAP17AQ02040 695 aaKnown RBP18.17■□□□□ 0.5
PTPRU-210ENST00000527027 TBC1D8BQ0IIM8 1120 aa18.17■□□□□ 0.5
PTPRU-210ENST00000527027 NLRP7Q8WX94 980 aa18.17■□□□□ 0.5
PTPRU-210ENST00000527027 CCDC136Q96JN2 1154 aa18.17■□□□□ 0.5
PTPRU-210ENST00000527027 POMKQ9H5K3 350 aa18.17■□□□□ 0.5
PTPRU-210ENST00000527027 CHST12Q9NRB3 414 aa18.17■□□□□ 0.5
PTPRU-210ENST00000527027 FAM86C1Q9NVL1 165 aa18.17■□□□□ 0.5
PTPRU-210ENST00000527027 SORCS3Q9UPU3 1222 aa18.17■□□□□ 0.5
PTPRU-210ENST00000527027 C2CD4DB7Z1M9 353 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 NT5C1B-RDH14C9J2C7 533 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 EDIL3O43854 480 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 GAS7O60861 476 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 CPA1P15085 419 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 MTHFRP42898 656 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 USP11P51784 963 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 JAK3P52333 1124 aa18.16■□□□□ 0.5
PTPRU-210ENST00000527027 MTMR3Q13615 1198 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms