RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 TRPV6Q9H1D0 765 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 GGT7Q9UJ14 662 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 ADCY9O60503 1353 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 FAM107AO95990 144 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 SERPINB8P50452 374 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 PTGISQ16647 500 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 SLC27A3Q5K4L6 730 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 FANCBQ8NB91 859 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 RCOR1Q9UKL0 485 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 KLRF2D3W0D1 207 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 STRNO43815 780 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 PAX3P23760 479 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 TMED2Q15363 201 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 ARHGEF16Q5VV41 709 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 BTNL9Q6UXG8 535 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 CDR2LQ86X02 465 aaPredicted RBP13.21□□□□□ -0.29
FGFR1-227ENST00000526570 TRIM15Q9C019 465 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 RNPEPQ9H4A4 650 aa13.21□□□□□ -0.29
FGFR1-227ENST00000526570 ADD2P35612 726 aa13.21□□□□□ -0.3
FGFR1-227ENST00000526570 VHLP40337 213 aa13.21□□□□□ -0.3
FGFR1-227ENST00000526570 CNGA3Q16281 694 aa13.21□□□□□ -0.3
FGFR1-227ENST00000526570 TXNRD1Q16881 649 aa13.21□□□□□ -0.3
FGFR1-227ENST00000526570 NLRP9Q7RTR0 991 aa13.21□□□□□ -0.3
FGFR1-227ENST00000526570 SYNE4Q8N205 404 aa13.21□□□□□ -0.3
FGFR1-227ENST00000526570 FMO2Q99518 471 aa13.21□□□□□ -0.3
FGFR1-227ENST00000526570 PIM2Q9P1W9 311 aa13.21□□□□□ -0.3
FGFR1-227ENST00000526570 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.3
FGFR1-227ENST00000526570 PGRMC1O00264 195 aaKnown RBP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 PRKAB2O43741 272 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 SORBS3O60504 671 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 WDR47O94967 919 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 ATP6V1G2O95670 118 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 HP1BP3Q5SSJ5 553 aaPredicted RBP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 CAPN12Q6ZSI9 719 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 RAPGEF5Q92565 580 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 ZNF274Q96GC6 653 aaPredicted RBP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 LSM14BQ9BX40 385 aaKnown RBP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 CCDC90BQ9GZT6 254 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 NHEJ1Q9H9Q4 299 aaPredicted RBP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 HDAC6Q9UBN7 1215 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 SPATA31A6Q5VVP1 1343 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 BCORL1Q5H9F3 1711 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 USP17L3A6NCW0 530 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 USP17L4A6NCW7 530 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 TAF4O00268 1085 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 COBLO75128 1261 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 S100A5P33763 92 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 SEC24CP53992 1094 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 VPS72Q15906 364 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 USP17L1Q7RTZ2 530 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 LCORLQ8N3X6 602 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 TRIM17Q9Y577 477 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 NEXMIFQ5QGS0 1516 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 DIP2BQ9P265 1576 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 RSPH10B2B2RC85 870 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 IPO5O00410 1097 aaKnown RBP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 GDF11O95390 407 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 DLGAP3O95886 979 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 RSPH10BP0C881 870 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 HSPA8P11142 646 aaKnown RBP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 TUBA3CQ13748 450 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 PATL1Q86TB9 770 aaKnown RBP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 PSTPIP2Q9H939 334 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 ZMYM6O95789 1325 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 A0A0G2JND7 137 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 GOLGA8CPA6NN73 597 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 FTCDO95954 541 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 KIF11P52732 1056 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 NCAPG2Q86XI2 1143 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 PARD3BQ8TEW8 1205 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 MAML1Q92585 1016 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 LSG1Q9H089 658 aaKnown RBP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 SMYD3Q9H7B4 428 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 ADGRG1Q9Y653 693 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 CDHR2Q9BYE9 1310 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 TESPA1A2RU30 521 aaPredicted RBP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 PHF20L1A8MW92 1017 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 LARGE1O95461 756 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 IGKV5-2P06315 115 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 ADD1P35611 737 aaKnown RBP13.2□□□□□ -0.3
FGFR1-227ENST00000526570 KIF22Q14807 665 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 SPICE1Q8N0Z3 855 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 RETREG2Q8NC44 543 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 SLC26A7Q8TE54 656 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 SLC38A10Q9HBR0 1119 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 STK24Q9Y6E0 443 aa13.2□□□□□ -0.3
FGFR1-227ENST00000526570 KIDINS220Q9ULH0 1771 aa13.19□□□□□ -0.3
FGFR1-227ENST00000526570 KRR1Q13601 381 aaKnown RBP13.19□□□□□ -0.3
FGFR1-227ENST00000526570 LIN9Q5TKA1 542 aa13.19□□□□□ -0.3
FGFR1-227ENST00000526570 CIAPIN1Q6FI81 312 aa13.19□□□□□ -0.3
FGFR1-227ENST00000526570 ZNF589Q86UQ0 364 aaPredicted RBP13.19□□□□□ -0.3
FGFR1-227ENST00000526570 ATAD3AQ9NVI7 634 aa13.19□□□□□ -0.3
FGFR1-227ENST00000526570 DNM3Q9UQ16 869 aa13.19□□□□□ -0.3
FGFR1-227ENST00000526570 ZNF839A8K0R7 811 aa13.19□□□□□ -0.3
FGFR1-227ENST00000526570 EPB41P11171 864 aaKnown RBP13.19□□□□□ -0.3
FGFR1-227ENST00000526570 SCTRP47872 440 aa13.19□□□□□ -0.3
FGFR1-227ENST00000526570 TUBA1BP68363 451 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms