RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 EARS2Q5JPH6 523 aaKnown RBP12.39□□□□□ -0.43
NEDD8-204ENST00000526430 PPP1R18Q6NYC8 613 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 FAM43BQ6ZT52 329 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-204ENST00000526430 RSPH3Q86UC2 560 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 CASP10Q92851 521 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 MLXIPQ9HAP2 919 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 RNF216Q9NWF9 866 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-204ENST00000526430 ZNF215Q9UL58 517 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-204ENST00000526430 PCDHA6Q9UN73 950 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 PCDHA8Q9Y5H6 950 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 DOCK8Q8NF50 2099 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 RPLP2P05387 115 aaKnown RBP12.38□□□□□ -0.43
NEDD8-204ENST00000526430 GJB2P29033 226 aa12.38□□□□□ -0.43
NEDD8-204ENST00000526430 MRPS9P82933 396 aaKnown RBP12.38□□□□□ -0.43
NEDD8-204ENST00000526430 ARHGAP4P98171 946 aa12.38□□□□□ -0.43
NEDD8-204ENST00000526430 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
NEDD8-204ENST00000526430 RTN4RL1Q86UN2 441 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-204ENST00000526430 VSIG10LQ86VR7 867 aa12.38□□□□□ -0.43
NEDD8-204ENST00000526430 FCHSD1Q86WN1 690 aa12.38□□□□□ -0.43
NEDD8-204ENST00000526430 DAGLBQ8NCG7 672 aa12.38□□□□□ -0.43
NEDD8-204ENST00000526430 INTS4Q96HW7 963 aaKnown RBP12.38□□□□□ -0.43
NEDD8-204ENST00000526430 ZFP91Q96JP5 570 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-204ENST00000526430 PGBD1Q96JS3 809 aa12.38□□□□□ -0.43
NEDD8-204ENST00000526430 PDCD2LQ9BRP1 358 aa12.38□□□□□ -0.43
NEDD8-204ENST00000526430 APOL5Q9BWW9 433 aa12.38□□□□□ -0.43
NEDD8-204ENST00000526430 CDH22Q9UJ99 828 aa12.38□□□□□ -0.43
NEDD8-204ENST00000526430 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 EVPLQ92817 2033 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 NOP56O00567 594 aaKnown RBP12.37□□□□□ -0.43
NEDD8-204ENST00000526430 ADRB1P08588 477 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 ARP10275 920 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 ADCY7P51828 1080 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 HMGN5P82970 282 aaKnown RBP12.37□□□□□ -0.43
NEDD8-204ENST00000526430 COL9A2Q14055 689 aaPredicted RBP12.37□□□□□ -0.43
NEDD8-204ENST00000526430 PGM5Q15124 567 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 FAM177A1Q8N128 213 aaPredicted RBP12.37□□□□□ -0.43
NEDD8-204ENST00000526430 DCLK2Q8N568 766 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 GPR161Q8N6U8 529 aaKnown RBP12.37□□□□□ -0.43
NEDD8-204ENST00000526430 SUMF1Q8NBK3 374 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 FBXO18Q8NFZ0 1043 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 CUL5Q93034 780 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 BORCS6Q96GS4 357 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 AGO3Q9H9G7 860 aaKnown RBP12.37□□□□□ -0.43
NEDD8-204ENST00000526430 ERVK-5Q9HDB9 667 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 NGRNQ9NPE2 291 aaKnown RBP12.37□□□□□ -0.43
NEDD8-204ENST00000526430 LIMD1Q9UGP4 676 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 PCDHA4Q9UN74 947 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 DUSP12Q9UNI6 340 aa12.37□□□□□ -0.43
NEDD8-204ENST00000526430 FAM205CA6NFA0 338 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 BTBD18B2RXH4 712 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 SORBS3O60504 671 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 CD52P31358 61 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 ATXN1P54253 815 aaKnown RBP12.36□□□□□ -0.43
NEDD8-204ENST00000526430 NLRP5P59047 1200 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 PLCB3Q01970 1234 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 GUCY1B3Q02153 619 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 NR5A1Q13285 461 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 TDGQ13569 410 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 JAKMIP3Q5VZ66 844 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 PLPP4Q5VZY2 271 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 KIAA1841Q6NSI8 718 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 LLGL2Q6P1M3 1020 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 METTL7BQ6UX53 244 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 RUFY4Q6ZNE9 571 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 TEX2Q8IWB9 1127 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 THNSL1Q8IYQ7 743 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 BLIDQ8IZY5 108 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 COLGALT1Q8NBJ5 622 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 MRPS27Q92552 414 aaKnown RBP12.36□□□□□ -0.43
NEDD8-204ENST00000526430 C6orf50Q9HD87 102 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 CYP26B1Q9NR63 512 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 FOXD4L1Q9NU39 408 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 CDY2AQ9Y6F7 541 aa12.36□□□□□ -0.43
NEDD8-204ENST00000526430 CNOT1A5YKK6 2376 aaKnown RBP12.36□□□□□ -0.43
NEDD8-204ENST00000526430 MBLAC1A4D2B0 266 aaPredicted RBP12.35□□□□□ -0.43
NEDD8-204ENST00000526430 PRR5-ARHGAP8B1AHC4 643 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 WNT7AO00755 349 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 EOMESO95936 686 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 MYCLP12524 364 aaPredicted RBP12.35□□□□□ -0.43
NEDD8-204ENST00000526430 GATMP50440 423 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 FOSBP53539 338 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 ARHGAP8P85298 464 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 GALNT17Q6IS24 598 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 TRIM50Q86XT4 487 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 SIX5Q8N196 739 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 WASF1Q92558 559 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 GPR20Q99678 358 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 TCF25Q9BQ70 676 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 ANO3Q9BYT9 981 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 PUF60Q9UHX1 559 aaKnown RBP12.35□□□□□ -0.43
NEDD8-204ENST00000526430 LRFN2Q9ULH4 789 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 HCFC2Q9Y5Z7 792 aa12.35□□□□□ -0.43
NEDD8-204ENST00000526430 HIDE1A8MVS5 230 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 CYP3A4P08684 503 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 ITGB5P18084 799 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 LAG3P18627 525 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 GNA11P29992 359 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 SREBF1P36956 1147 aa12.34□□□□□ -0.43
NEDD8-204ENST00000526430 SARSP49591 514 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms