RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 APOL5Q9BWW9 433 aa10.84□□□□□ -0.67
TRAPPC4-206ENST00000525303 TMEM117Q9H0C3 514 aa10.84□□□□□ -0.67
TRAPPC4-206ENST00000525303 FAM217BQ9NTX9 383 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-206ENST00000525303 TBC1D22BQ9NU19 505 aa10.84□□□□□ -0.67
TRAPPC4-206ENST00000525303 PUF60Q9UHX1 559 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-206ENST00000525303 AKT3Q9Y243 479 aa10.84□□□□□ -0.67
TRAPPC4-206ENST00000525303 LZTS1Q9Y250 596 aa10.84□□□□□ -0.67
TRAPPC4-206ENST00000525303 MAFBQ9Y5Q3 323 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-206ENST00000525303 MTCL1Q9Y4B5 1905 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-206ENST00000525303 ADAMTS3O15072 1205 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 HOXA2O43364 376 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 PSAPP07602 524 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 CYP3A4P08684 503 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 VCPP55072 806 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 NLRP11P59045 1033 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 SETQ01105 290 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 ADCK5Q3MIX3 580 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 EFCAB12Q6NXP0 572 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 SYCE2Q6PIF2 218 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 KCNT2Q6UVM3 1135 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 DHX32Q7L7V1 743 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 ZBTB33Q86T24 672 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 SMAP1Q8IYB5 467 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 ABI1Q8IZP0 508 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 LRRC43Q8N309 656 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 RASGRP4Q8TDF6 673 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 CASD1Q96PB1 797 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 NGRNQ9NPE2 291 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 RNF19AQ9NV58 838 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 GABBR1Q9UBS5 961 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 TCEAL9Q9UHQ7 104 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 CDH22Q9UJ99 828 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 NAP1L2Q9ULW6 460 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 CEP131Q9UPN4 1083 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 PCDHA10Q9Y5I2 948 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 ARID2Q68CP9 1835 aa10.83□□□□□ -0.68
TRAPPC4-206ENST00000525303 MAGEB2O15479 319 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 ZSCAN20P17040 1043 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 ADD1P35611 737 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 PPM1AP35813 382 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 KRT17Q04695 432 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 PFKFB3Q16875 520 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 PRR16Q569H4 304 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 TMC7Q7Z402 723 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 ECHDC2Q86YB7 292 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 RASEFQ8IZ41 740 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 REXO1Q8N1G1 1221 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 LRRC71Q8N4P6 559 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 LINC01465Q8N7H1 131 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 RNF169Q8NCN4 708 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 ZNF668Q96K58 619 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 ZNF558Q96NG5 402 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 MAP7D2Q96T17 732 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 ZMYND12Q9H0C1 365 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 ADAMTS10Q9H324 1103 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 FAM86C1Q9NVL1 165 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 SPG21Q9NZD8 308 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 SAMM50Q9Y512 469 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 PTPRZ1P23471 2315 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 RIF1Q5UIP0 2472 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 FAM186AA6NE01 2351 aa10.82□□□□□ -0.68
TRAPPC4-206ENST00000525303 ESYT2A0FGR8 921 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 PDGFBP01127 241 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 HOXB8P17481 243 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 EIF4BP23588 611 aaKnown RBP10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 TMOD1P28289 359 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 AVPR2P30518 371 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 METAP2P50579 478 aaKnown RBP eCLIP10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 GPC3P51654 580 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 SMC1AQ14683 1233 aaKnown RBP10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 CLLU1OSQ5K130 101 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 HELQQ8TDG4 1101 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 CASP10Q92851 521 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 FAM167AQ96KS9 214 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 BACH2Q9BYV9 841 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 TM6SF1Q9BZW5 370 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 C6orf50Q9HD87 102 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 TSHZ2Q9NRE2 1034 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 NR2E1Q9Y466 385 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 SNX14Q9Y5W7 946 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 HCFC2Q9Y5Z7 792 aa10.81□□□□□ -0.68
TRAPPC4-206ENST00000525303 DOCK8Q8NF50 2099 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 C2orf71A6NGG8 1288 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 WDR64B1ANS9 1081 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 NT5C1B-RDH14C9J2C7 533 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 ST18O60284 1047 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 ZNF862O60290 1169 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 OATP04181 439 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 DARSP14868 501 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 FGFR4P22455 802 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 CA8P35219 290 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 RCAN1P53805 252 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 FGD1P98174 961 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 TPRNQ4KMQ1 711 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 MCTP2Q6DN12 878 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 CES5AQ6NT32 575 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 BLOC1S2Q6QNY1 142 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 SLC39A11Q8N1S5 342 aa10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 MRPL43Q8N983 215 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-206ENST00000525303 KREMEN2Q8NCW0 462 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms