RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 CEP131Q9UPN4 1083 aa14.1□□□□□ -0.15
SMCO4-202ENST00000525141 ATG2AQ2TAZ0 1938 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 CCDC194A0A1B0GVG4 234 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 DDX11L8A8MPP1 907 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 BTBD18B2RXH4 712 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 ZBTB39O15060 712 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 CSDE1O75534 798 aaKnown RBP14.09□□□□□ -0.15
SMCO4-202ENST00000525141 FGFR4P22455 802 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 EIF4BP23588 611 aaKnown RBP14.09□□□□□ -0.15
SMCO4-202ENST00000525141 CTNNB1P35222 781 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 LTBRP36941 435 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 GPC3P51654 580 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 SPIRE1Q08AE8 756 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 PPP2R5CQ13362 524 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 TRIM29Q14134 588 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 AAK1Q2M2I8 961 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 PAN2Q504Q3 1202 aaKnown RBP14.09□□□□□ -0.15
SMCO4-202ENST00000525141 LRRC55Q6ZSA7 311 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 SLC24A5Q71RS6 500 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 FAM184AQ8NB25 1140 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 SNX21Q969T3 373 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 FAM20AQ96MK3 541 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 UBE2ZQ9H832 354 aaPredicted RBP14.09□□□□□ -0.15
SMCO4-202ENST00000525141 BRMS1Q9HCU9 246 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 CD320Q9NPF0 282 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 HCSTQ9UBK5 93 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 KIF3AQ9Y496 699 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.09□□□□□ -0.15
SMCO4-202ENST00000525141 PCDHB7Q9Y5E2 793 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 RALGAPA2Q2PPJ7 1873 aa14.09□□□□□ -0.15
SMCO4-202ENST00000525141 FNDC1Q4ZHG4 1894 aaPredicted RBP14.08□□□□□ -0.16
SMCO4-202ENST00000525141 CCNT1O60563 726 aaKnown RBP14.08□□□□□ -0.16
SMCO4-202ENST00000525141 MAFO75444 373 aaPredicted RBP14.08□□□□□ -0.16
SMCO4-202ENST00000525141 MMP1P03956 469 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 ITGB1P05556 798 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 STAG3L1P0CL83 205 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 DARSP14868 501 aaKnown RBP14.08□□□□□ -0.16
SMCO4-202ENST00000525141 GTF2F1P35269 517 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMCO4-202ENST00000525141 NPEPPSP55786 919 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 PSMC5P62195 406 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 CUL4AQ13619 759 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 PTPROQ16827 1216 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 LEXMQ3ZCV2 418 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 MTERF2Q49AM1 385 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 FAM43BQ6ZT52 329 aaPredicted RBP14.08□□□□□ -0.16
SMCO4-202ENST00000525141 KLHL23Q8NBE8 558 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 NEK9Q8TD19 979 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 CWH43Q9H720 699 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 TCEAL9Q9UHQ7 104 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 AKT3Q9Y243 479 aa14.08□□□□□ -0.16
SMCO4-202ENST00000525141 TBX3O15119 743 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 FGFR1P11362 822 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 IBSPP21815 317 aaPredicted RBP14.07□□□□□ -0.16
SMCO4-202ENST00000525141 TMOD1P28289 359 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 IRS1P35568 1242 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 KRT2P35908 639 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 TBC1D8BQ0IIM8 1120 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 HYAL1Q12794 435 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 EPHA7Q15375 998 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 CTC1Q2NKJ3 1217 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 PLA2G4FQ68DD2 849 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 KSR1Q8IVT5 923 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 FBXO18Q8NFZ0 1043 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 KHSRPQ92945 711 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMCO4-202ENST00000525141 P2RX5Q93086 422 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 C8orf76Q96K31 380 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 PLVAPQ9BX97 442 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 ELAC1Q9H777 363 aaKnown RBP14.07□□□□□ -0.16
SMCO4-202ENST00000525141 C1orf112Q9NSG2 853 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 TYW1Q9NV66 732 aaKnown RBP14.07□□□□□ -0.16
SMCO4-202ENST00000525141 RGL1Q9NZL6 768 aa14.07□□□□□ -0.16
SMCO4-202ENST00000525141 KIAA1671Q9BY89 1806 aa14.06□□□□□ -0.16
SMCO4-202ENST00000525141 A0A087WZ62 844 aa14.06□□□□□ -0.16
SMCO4-202ENST00000525141 DENND3A2RUS2 1198 aa14.06□□□□□ -0.16
SMCO4-202ENST00000525141 SLITRK3O94933 977 aa14.06□□□□□ -0.16
SMCO4-202ENST00000525141 GCFC2P16383 781 aaKnown RBP14.06□□□□□ -0.16
SMCO4-202ENST00000525141 KCNA5P22460 613 aa14.06□□□□□ -0.16
SMCO4-202ENST00000525141 QARSP47897 775 aaKnown RBP14.06□□□□□ -0.16
SMCO4-202ENST00000525141 DLX2Q07687 328 aaPredicted RBP14.06□□□□□ -0.16
SMCO4-202ENST00000525141 SAFBQ15424 915 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMCO4-202ENST00000525141 ODR4Q5SWX8 454 aa14.06□□□□□ -0.16
SMCO4-202ENST00000525141 ZNF598Q86UK7 904 aaKnown RBP14.06□□□□□ -0.16
SMCO4-202ENST00000525141 CASD1Q96PB1 797 aa14.06□□□□□ -0.16
SMCO4-202ENST00000525141 FDXACB1Q9BRP7 624 aaPredicted RBP14.06□□□□□ -0.16
SMCO4-202ENST00000525141 C11orf84Q9BUA3 381 aaPredicted RBP14.06□□□□□ -0.16
SMCO4-202ENST00000525141 LMAN2LQ9H0V9 348 aa14.06□□□□□ -0.16
SMCO4-202ENST00000525141 NSUN3Q9H649 340 aaKnown RBP14.06□□□□□ -0.16
SMCO4-202ENST00000525141 TMEM161AQ9NX61 479 aa14.06□□□□□ -0.16
SMCO4-202ENST00000525141 SUCLA2Q9P2R7 463 aaPredicted RBP14.06□□□□□ -0.16
SMCO4-202ENST00000525141 SEPT9Q9UHD8 586 aaPredicted RBP14.06□□□□□ -0.16
SMCO4-202ENST00000525141 LRFN2Q9ULH4 789 aa14.06□□□□□ -0.16
SMCO4-202ENST00000525141 RWDD3Q9Y3V2 267 aa14.06□□□□□ -0.16
SMCO4-202ENST00000525141 GRXCR2A6NFK2 248 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 TBKBP1A7MCY6 615 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 H3BQ06 376 aaPredicted RBP14.05□□□□□ -0.16
SMCO4-202ENST00000525141 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
SMCO4-202ENST00000525141 P4HBP07237 508 aaKnown RBP14.05□□□□□ -0.16
SMCO4-202ENST00000525141 FOSBP53539 338 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 NAALADL2Q58DX5 795 aa14.05□□□□□ -0.16
SMCO4-202ENST00000525141 ADGRD2Q7Z7M1 963 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms