RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 TECP42680 631 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 SARSP49591 514 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 SKIV2LQ15477 1246 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 MCTP1Q6DN14 999 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 OTUD6AQ7L8S5 288 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 TMEM192Q8IY95 271 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 CRIPAKQ8N1N5 446 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 TMEM143Q96AN5 459 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 HSD17B14Q9BPX1 270 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 FDXACB1Q9BRP7 624 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 BACH2Q9BYV9 841 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 RC3H2Q9HBD1 1191 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 RGS18Q9NS28 235 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 PCDHB7Q9Y5E2 793 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 GTF3C3Q9Y5Q9 886 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 ADGRA3Q8IWK6 1321 aa14.37□□□□□ -0.11
TRAPPC4-205ENST00000525079 COL4A6Q14031 1691 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 CDH23Q9H251 3354 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 NLRC5Q86WI3 1866 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 OR52Z1P0C646 297 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 CTNNB1P35222 781 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 MCM2P49736 904 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 POLGP54098 1239 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 GPM6BQ13491 265 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 DSC3Q14574 896 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 SLC7A3Q8WY07 619 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 NLRP4Q96MN2 994 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 SAMD11Q96NU1 681 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 GCOM2Q9BZD3 368 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 C1orf112Q9NSG2 853 aa14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 NOL7Q9UMY1 257 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-205ENST00000525079 C9IYK1 514 aa14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 SRGAP2CP0DJJ0 459 aa14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 ZSCAN20P17040 1043 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 U2AF2P26368 475 aaKnown RBP eCLIP14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 RFC5P40937 340 aa14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 TOB1P50616 345 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 FAM102BQ5T8I3 360 aa14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 SLC24A5Q71RS6 500 aa14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 PIGOQ8TEQ8 1089 aa14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 PRPF31Q8WWY3 499 aaKnown RBP14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 JPH2Q9BR39 696 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 DHX33Q9H6R0 707 aaKnown RBP14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 SMC3Q9UQE7 1217 aa14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 KIF3AQ9Y496 699 aa14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 PCDHB6Q9Y5E3 794 aa14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 MRPL42Q9Y6G3 142 aaKnown RBP14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 ARID2Q68CP9 1835 aa14.35□□□□□ -0.11
TRAPPC4-205ENST00000525079 H3BNC9 293 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 H3BQV1 296 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 DLL1O00548 723 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 MED24O75448 989 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 LYPLA2O95372 231 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 LINC00271P0C7V0 271 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 SPATA31C1P0DKV0 1188 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 FGFR1P11362 822 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 BMPR1AP36894 532 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 CDC42EP1Q00587 391 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 EMC2Q15006 297 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 CMTR2Q8IYT2 770 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 ZNF710Q8N1W2 664 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 C4orf32Q8N8J7 132 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 RNF169Q8NCN4 708 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 IL27Q8NEV9 243 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 NEK9Q8TD19 979 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 COL4A3BPQ9Y5P4 624 aa14.34□□□□□ -0.11
TRAPPC4-205ENST00000525079 RALGAPA2Q2PPJ7 1873 aa14.33□□□□□ -0.11
TRAPPC4-205ENST00000525079 PRRC2BQ5JSZ5 2229 aaKnown RBP14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 TBKBP1A7MCY6 615 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 CSPG5O95196 566 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 TRAPPC10P48553 1259 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 FAM189BP81408 668 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 LAMTOR4Q0VGL1 99 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 ORC2Q13416 577 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 ZNF410Q86VK4 478 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 CATSPER3Q86XQ3 398 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 EXOC8Q8IYI6 725 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 PSPC1Q8WXF1 523 aaKnown RBP14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 CCDC43Q96MW1 224 aaKnown RBP14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 MTRQ99707 1265 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 ATP6V0A4Q9HBG4 840 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 XPNPEP1Q9NQW7 623 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 ANKEF1Q9NU02 776 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 LMCD1Q9NZU5 365 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 THEGQ9P2T0 379 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 PPME1Q9Y570 386 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 TRANK1O15050 2925 aa14.33□□□□□ -0.12
TRAPPC4-205ENST00000525079 KIAA1671Q9BY89 1806 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 EYSQ5T1H1 3165 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 GRM6O15303 877 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 KCNA4P22459 653 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 TFF2Q03403 129 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 PTGDRQ13258 359 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 SPOUT1Q5T280 376 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 LARP1BQ659C4 914 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 MAEAQ7L5Y9 396 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 CATSPER4Q7RTX7 472 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 ECHDC2Q86YB7 292 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 TCP11Q8WWU5 503 aa14.32□□□□□ -0.12
TRAPPC4-205ENST00000525079 CLP1Q92989 425 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms