RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 CCSER1Q9C0I3 900 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 CDHR5Q9HBB8 845 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 ERVK-5Q9HDB9 667 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 DDX19AQ9NUU7 478 aaKnown RBP16.82■□□□□ 0.28
SF3B2-202ENST00000524475 PADI3Q9ULW8 664 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 DNM3Q9UQ16 869 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 COL4A3BPQ9Y5P4 624 aa16.82■□□□□ 0.28
SF3B2-202ENST00000524475 TTC3P53804 2025 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 ARHGEF35A5YM69 484 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 GPR182O15218 404 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 PPP6R2O75170 966 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 RPS6KA5O75582 802 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 EYA4O95677 639 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 DARSP14868 501 aaKnown RBP16.81■□□□□ 0.28
SF3B2-202ENST00000524475 ATP2A2P16615 1042 aaKnown RBP16.81■□□□□ 0.28
SF3B2-202ENST00000524475 CDC25AP30304 524 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 CD52P31358 61 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 ARL2P36404 184 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 UBA7P41226 1012 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 TMEM119Q4V9L6 283 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 FAM109BQ6ICB4 259 aaPredicted RBP16.81■□□□□ 0.28
SF3B2-202ENST00000524475 FAM228AQ86W67 206 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 GCOM2Q9BZD3 368 aaPredicted RBP16.81■□□□□ 0.28
SF3B2-202ENST00000524475 INO80BQ9C086 356 aaPredicted RBP16.81■□□□□ 0.28
SF3B2-202ENST00000524475 NOC2LQ9Y3T9 749 aaKnown RBP16.81■□□□□ 0.28
SF3B2-202ENST00000524475 COL4A6Q14031 1691 aa16.81■□□□□ 0.28
SF3B2-202ENST00000524475 GBF1Q92538 1859 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 CYP11B2P19099 503 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 GRIN1Q05586 938 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 PCBP1Q15365 356 aaKnown RBP eCLIP16.8■□□□□ 0.28
SF3B2-202ENST00000524475 RAB30Q15771 203 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 CABP7Q86V35 215 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
SF3B2-202ENST00000524475 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 KRI1Q8N9T8 703 aaKnown RBP16.8■□□□□ 0.28
SF3B2-202ENST00000524475 PRPF31Q8WWY3 499 aaKnown RBP16.8■□□□□ 0.28
SF3B2-202ENST00000524475 NLRP7Q8WX94 980 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 TMEM143Q96AN5 459 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 PNMA5Q96PV4 448 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 NFKBIZQ9BYH8 718 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 TSPYL2Q9H2G4 693 aaPredicted RBP16.8■□□□□ 0.28
SF3B2-202ENST00000524475 BHMT2Q9H2M3 363 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 CFAP45Q9UL16 551 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 GINS2Q9Y248 185 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 ZDHHC9Q9Y397 364 aa16.8■□□□□ 0.28
SF3B2-202ENST00000524475 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.79■□□□□ 0.28
SF3B2-202ENST00000524475 USO1O60763 962 aaKnown RBP16.79■□□□□ 0.28
SF3B2-202ENST00000524475 AMHP03971 560 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 MARCKSP29966 332 aaPredicted RBP16.79■□□□□ 0.28
SF3B2-202ENST00000524475 DDIT3P35638 169 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 LAMTOR4Q0VGL1 99 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 GRB10Q13322 594 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 STK38Q15208 465 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 PADI6Q6TGC4 694 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 HERC6Q8IVU3 1022 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 CALML4Q96GE6 196 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 CDK5RAP3Q96JB5 506 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 TIPINQ9BVW5 301 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 CSRNP2Q9H175 543 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 TMX1Q9H3N1 280 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 IFT122Q9HBG6 1241 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 KCND2Q9NZV8 630 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 ST3GAL5Q9UNP4 418 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 PCDHA11Q9Y5I1 949 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 ATP6V1DQ9Y5K8 247 aa16.79■□□□□ 0.28
SF3B2-202ENST00000524475 CDH23Q9H251 3354 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 A0A087WZ62 844 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 SPTLC2O15270 562 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 GJB5O95377 273 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 SFPQP23246 707 aaKnown RBP eCLIP16.78■□□□□ 0.28
SF3B2-202ENST00000524475 DNAJB2P25686 324 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 DEFB103AP81534 67 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 CEBPZQ03701 1054 aaKnown RBP16.78■□□□□ 0.28
SF3B2-202ENST00000524475 TFDP1Q14186 410 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 KCNK18Q7Z418 384 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 SRGAP1Q7Z6B7 1085 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 SYT2Q8N9I0 419 aaPredicted RBP16.78■□□□□ 0.28
SF3B2-202ENST00000524475 KCNG4Q8TDN1 519 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 LINC01599Q8WXQ3 324 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 TOP1MTQ969P6 601 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 LRCH3Q96II8 777 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 SCLT1Q96NL6 688 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 FDXACB1Q9BRP7 624 aaPredicted RBP16.78■□□□□ 0.28
SF3B2-202ENST00000524475 PBX4Q9BYU1 374 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
SF3B2-202ENST00000524475 CHD7Q9P2D1 2997 aa16.78■□□□□ 0.28
SF3B2-202ENST00000524475 A0A087WWV3 80 aa16.77■□□□□ 0.28
SF3B2-202ENST00000524475 E9PMD0 336 aa16.77■□□□□ 0.28
SF3B2-202ENST00000524475 ENPP3O14638 875 aa16.77■□□□□ 0.28
SF3B2-202ENST00000524475 PHKA2P46019 1235 aa16.77■□□□□ 0.28
SF3B2-202ENST00000524475 PTENP60484 403 aa16.77■□□□□ 0.28
SF3B2-202ENST00000524475 NUCB2P80303 420 aa16.77■□□□□ 0.28
SF3B2-202ENST00000524475 DSC3Q14574 896 aa16.77■□□□□ 0.28
SF3B2-202ENST00000524475 FOXD4L5Q5VV16 416 aaPredicted RBP16.77■□□□□ 0.28
SF3B2-202ENST00000524475 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.77■□□□□ 0.28
SF3B2-202ENST00000524475 KSR1Q8IVT5 923 aa16.77■□□□□ 0.28
SF3B2-202ENST00000524475 FOXD4L4Q8WXT5 416 aaPredicted RBP16.77■□□□□ 0.28
SF3B2-202ENST00000524475 KIFAP3Q92845 792 aa16.77■□□□□ 0.28
SF3B2-202ENST00000524475 NLRP4Q96MN2 994 aa16.77■□□□□ 0.28
SF3B2-202ENST00000524475 PPP1R16BQ96T49 567 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms