RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 VTI1AQ96AJ9 217 aa10.94□□□□□ -0.66
VPS13B-212ENST00000524330 NIFKQ9BYG3 293 aaKnown RBP10.94□□□□□ -0.66
VPS13B-212ENST00000524330 SMARCAD1Q9H4L7 1026 aa10.94□□□□□ -0.66
VPS13B-212ENST00000524330 ABHD10Q9NUJ1 306 aa10.94□□□□□ -0.66
VPS13B-212ENST00000524330 DDX41Q9UJV9 622 aaKnown RBP10.94□□□□□ -0.66
VPS13B-212ENST00000524330 ASTN1O14525 1302 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 SYNGAP1Q96PV0 1343 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 IGKV6D-21A0A0A0MT36 114 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 GTPBP10A4D1E9 387 aaKnown RBP10.93□□□□□ -0.66
VPS13B-212ENST00000524330 ZBTB39O15060 712 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 NKRFO15226 690 aaKnown RBP eCLIP10.93□□□□□ -0.66
VPS13B-212ENST00000524330 GH1P01241 217 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 PGK2P07205 417 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 TXNP10599 105 aaKnown RBP10.93□□□□□ -0.66
VPS13B-212ENST00000524330 FECHP22830 423 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 CASP5P51878 434 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 MKRN3Q13064 507 aaKnown RBP10.93□□□□□ -0.66
VPS13B-212ENST00000524330 MAPK7Q13164 816 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 MTERF2Q49AM1 385 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 MIIPQ5JXC2 388 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 TCERG1LQ5VWI1 586 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 PLA2G4FQ68DD2 849 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 GBP6Q6ZN66 633 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 INTS8Q75QN2 995 aaKnown RBP10.93□□□□□ -0.66
VPS13B-212ENST00000524330 ANO5Q75V66 913 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 PLPPR4Q7Z2D5 763 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 CCDC60Q8IWA6 550 aaPredicted RBP10.93□□□□□ -0.66
VPS13B-212ENST00000524330 CCDC170Q8IYT3 715 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 GLIS3Q8NEA6 775 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 KIF18AQ8NI77 898 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 EFCC1Q9HA90 598 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 KIAA1586Q9HCI6 787 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 CEP72Q9P209 647 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 TRPM7Q96QT4 1865 aa10.93□□□□□ -0.66
VPS13B-212ENST00000524330 MYH9P35579 1960 aaKnown RBP10.92□□□□□ -0.66
VPS13B-212ENST00000524330 EMSYQ7Z589 1322 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 TTC26A0AVF1 554 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 CLIC2O15247 247 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 PPP1R37O75864 691 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 HOXC6P09630 235 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 CCDC172P0C7W6 258 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 ADORA2AP29274 412 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 TCF7P36402 384 aaPredicted RBP10.92□□□□□ -0.66
VPS13B-212ENST00000524330 NPEPPSP55786 919 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 CDK17Q00537 523 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 ENPEPQ07075 957 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 KCNH2Q12809 1159 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 EMC2Q15006 297 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 SPA17Q15506 151 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 ZNF792Q3KQV3 632 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 DCAF17Q5H9S7 520 aaPredicted RBP10.92□□□□□ -0.66
VPS13B-212ENST00000524330 SLFN12LQ6IEE8 588 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 RGMBQ6NW40 437 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 ARMCX2Q7L311 632 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 XXYLT1Q8NBI6 393 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 DEPTORQ8TB45 409 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 SYN2Q92777 582 aaPredicted RBP10.92□□□□□ -0.66
VPS13B-212ENST00000524330 BICD1Q96G01 975 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 SPATA33Q96N06 139 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 DNAJC7Q99615 494 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 NTPCRQ9BSD7 190 aaKnown RBP10.92□□□□□ -0.66
VPS13B-212ENST00000524330 STRA6Q9BX79 667 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 FGFBP2Q9BYJ0 223 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 DEF6Q9H4E7 631 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 ZFYVE28Q9HCC9 887 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 AGPAT3Q9NRZ7 376 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 TRMT1Q9NXH9 659 aaKnown RBP10.92□□□□□ -0.66
VPS13B-212ENST00000524330 MYO6Q9UM54 1294 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 PPP2R2CQ9Y2T4 447 aa10.92□□□□□ -0.66
VPS13B-212ENST00000524330 GSTTP1A0A1W2PQM5 241 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 DENND3A2RUS2 1198 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 SLC16A4O15374 487 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 P4HA2O15460 535 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 TGFB1I1O43294 461 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 ZNF862O60290 1169 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 HBP1O60381 514 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 LGR5O75473 907 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 RFX1P22670 979 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 NAMPTP43490 491 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 NPTX2P47972 431 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 FXR1P51114 621 aaKnown RBP eCLIP10.91□□□□□ -0.66
VPS13B-212ENST00000524330 CYP2J2P51589 502 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 EFNA5P52803 228 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 SP2Q02086 613 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 TFDP1Q14186 410 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 MXD4Q14582 209 aaPredicted RBP10.91□□□□□ -0.66
VPS13B-212ENST00000524330 TAF1CQ15572 869 aaPredicted RBP10.91□□□□□ -0.66
VPS13B-212ENST00000524330 EXOC3L4Q17RC7 722 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 ARHGAP29Q52LW3 1261 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 ZC2HC1CQ53FD0 456 aaPredicted RBP10.91□□□□□ -0.66
VPS13B-212ENST00000524330 IER5Q5VY09 327 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 E4F1Q66K89 784 aaPredicted RBP10.91□□□□□ -0.66
VPS13B-212ENST00000524330 EEPD1Q7L9B9 569 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 TRMT1LQ7Z2T5 733 aaKnown RBP10.91□□□□□ -0.66
VPS13B-212ENST00000524330 GPR142Q7Z601 462 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 RASAL3Q86YV0 1011 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 MAP4K3Q8IVH8 894 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 ZBTB8OSQ8IWT0 167 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 DAW1Q8N136 415 aa10.91□□□□□ -0.66
VPS13B-212ENST00000524330 EHBP1Q8NDI1 1231 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms