RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	TAOK3	Q9H2K8	898 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	HOMER3	Q9NSC5	361 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	STK24	Q9Y6E0	443 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	KIAA0391	O15091	583 aa	Known RBP	11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	AKAP3	O75969	853 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	NR3C1	P04150	777 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	BTD	P43251	543 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	SLC29A2	Q14542	456 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	ARSH	Q5FYA8	562 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	DCAF12L1	Q5VU92	463 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	ZNF804A	Q7Z570	1209 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	FBXO25	Q8TCJ0	367 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	RUNDC3B	Q96NL0	473 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	PRMT1	Q99873	361 aa	Known RBP	11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	AZI2	Q9H6S1	392 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	LRRC4C	Q9HCJ2	640 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	KCNMB3	Q9NPA1	279 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	OSGEP	Q9NPF4	335 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	MTMR4	Q9NYA4	1195 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	NOP53	Q9NZM5	478 aa	Known RBP	11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	PPP1R9A	Q9ULJ8	1098 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	C15orf41	Q9Y2V0	281 aa		11.11	□□□□□ -0.63
SPIDR-225	ENST00000524141	SBF2	Q86WG5	1849 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	MIF4GD	A9UHW6	222 aa	Known RBP	11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	PHF2	O75151	1096 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	CASP5	P51878	434 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	MFSD5	Q6N075	450 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	ZDHHC24	Q6UX98	284 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	LNX1	Q8TBB1	728 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	RNF25	Q96BH1	459 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	PSTPIP2	Q9H939	334 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	NR2E1	Q9Y466	385 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	RPTOR	Q8N122	1335 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	GPR75-ASB3	A0A0A6YYF3	556 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	SNX3	O60493	162 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	GGPS1	O95749	300 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	RPSA	P08865	295 aa	Known RBP	11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	KRT13	P13646	458 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	ALAD	P13716	330 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	CALR	P27797	417 aa	Known RBP	11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	MYO1E	Q12965	1108 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	GIT2	Q14161	759 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	BICDL1	Q6ZP65	573 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	SFR1	Q86XK3	245 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	GLYCTK	Q8IVS8	523 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	RHOT2	Q8IXI1	618 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	UBL4B	Q8N7F7	174 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	NSMCE1	Q8WV22	266 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	GLG1	Q92896	1179 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	FAXDC2	Q96IV6	333 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	IFT74	Q96LB3	600 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	STK33	Q9BYT3	514 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	JMJD4	Q9H9V9	463 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	PCYOX1	Q9UHG3	505 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	DNM3	Q9UQ16	869 aa		11.1	□□□□□ -0.63
SPIDR-225	ENST00000524141	RASGRF2	O14827	1237 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	RTN2	O75298	545 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	SUN1	O94901	812 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	NQO1	P15559	274 aa	Known RBP	11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	HADHB	P55084	474 aa	Known RBP	11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	ZNF543	Q08ER8	600 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	FAM133B	Q5BKY9	247 aa	Known RBP	11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	TNFAIP8L3	Q5GJ75	292 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	MOXD1	Q6UVY6	613 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	SLF2	Q8IX21	1173 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	ADGRF4	Q8IZF3	695 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	SYT2	Q8N9I0	419 aa	Predicted RBP	11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	GJA10	Q969M2	543 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	STAMBPL1	Q96FJ0	436 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	ANKIB1	Q9P2G1	1089 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	SNX24	Q9Y343	169 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	USP15	Q9Y4E8	981 aa	Predicted RBP	11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	ASTN1	O14525	1302 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	C10orf71	Q711Q0	1435 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	POTEF	A5A3E0	1075 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	ANKRD62	A6NC57	917 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	SMIM23	A6NLE4	172 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141		O00370	1275 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	MED24	O75448	989 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	ANP32D	O95626	131 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	OAS1	P00973	400 aa	Known RBP	11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	POTEI	P0CG38	1075 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	RARG	P13631	454 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	VCAM1	P19320	739 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	CYP3A7	P24462	503 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	ATP5D	P30049	168 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	IFI35	P80217	286 aa	Predicted RBP	11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	GPATCH4	Q5T3I0	446 aa	Known RBP	11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	POTEG	Q6S5H5	508 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	POTEE	Q6S8J3	1075 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	REEP2	Q9BRK0	252 aa		11.09	□□□□□ -0.63
SPIDR-225	ENST00000524141	ERVK-5	Q9HDB9	667 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms