RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 KRT85P78386 507 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 IL13RA1P78552 427 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 CDK17Q00537 523 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 U2AF1Q01081 240 aaKnown RBP eCLIP5.15□□□□□ -1.599e-7■■■■□ 24.3
SKP1-212ENST00000523966 SRSF2Q01130 221 aaKnown RBP5.15□□□□□ -1.59
SKP1-212ENST00000523966 PPARAQ07869 468 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 MOGSQ13724 837 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 PITRM1Q5JRX3 1037 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 ZBTB41Q5SVQ8 909 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 FAM180AQ6UWF9 173 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 WDR75Q8IWA0 830 aaKnown RBP5.15□□□□□ -1.59
SKP1-212ENST00000523966 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.15□□□□□ -1.59
SKP1-212ENST00000523966 OR14C36Q8NHC7 312 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 GAB3Q8WWW8 586 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 NTMQ9P121 344 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 ANKRD6Q9Y2G4 727 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 THRAP3Q9Y2W1 955 aaKnown RBP5.15□□□□□ -1.59
SKP1-212ENST00000523966 PCDHB6Q9Y5E3 794 aa5.15□□□□□ -1.59
SKP1-212ENST00000523966 A0A0G2JNJ9 132 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 DAPK3O43293 454 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 AKAP10O43572 662 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 PARNO95453 639 aaKnown RBP5.14□□□□□ -1.59
SKP1-212ENST00000523966 IL33O95760 270 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 ZSCAN20P17040 1043 aaPredicted RBP5.14□□□□□ -1.59
SKP1-212ENST00000523966 PI3P19957 117 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 THBS2P35442 1172 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 STILQ15468 1287 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 NFE2Q16621 373 aaPredicted RBP5.14□□□□□ -1.59
SKP1-212ENST00000523966 MAN2A1Q16706 1144 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 CCDC178Q5BJE1 867 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 CCDC181Q5TID7 509 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 UNQ6494/PRO21346Q6UXR6 183 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 BMP8AQ7Z5Y6 402 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 FAM129CQ86XR2 697 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 TMEM151BQ8IW70 566 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 TMEFF1Q8IYR6 380 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 FNIP1Q8TF40 1166 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 DYDC2Q96IM9 177 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 PAWRQ96IZ0 340 aaKnown RBP5.14□□□□□ -1.59
SKP1-212ENST00000523966 ORAI2Q96SN7 254 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 ACE2Q9BYF1 805 aaPredicted RBP5.14□□□□□ -1.59
SKP1-212ENST00000523966 KCTD10Q9H3F6 313 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 KCND1Q9NSA2 647 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 Q9UFV3 132 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 DPP7Q9UHL4 492 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 SAP30BPQ9UHR5 308 aaKnown RBP5.14□□□□□ -1.59
SKP1-212ENST00000523966 PRSS50Q9UI38 385 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 DENND2AQ9ULE3 1009 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 SMG5Q9UPR3 1016 aaKnown RBP5.14□□□□□ -1.59
SKP1-212ENST00000523966 GIT1Q9Y2X7 761 aa5.14□□□□□ -1.59
SKP1-212ENST00000523966 A0A0A6YYJ9 748 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 GOLGA6CA6NDK9 693 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 GOLGA6BA6NDN3 693 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 DDX3XO00571 662 aaKnown RBP eCLIP5.13□□□□□ -1.59
SKP1-212ENST00000523966 OPHN1O60890 802 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 FSBPO95073 299 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 PFKMP08237 780 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 GOLGA6DP0CG33 693 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 MED14OSP0DP75 135 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 OSMP13725 252 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 RPL13P26373 211 aaKnown RBP5.13□□□□□ -1.59
SKP1-212ENST00000523966 RAP1GAPP47736 663 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 SARSP49591 514 aaKnown RBP5.13□□□□□ -1.59
SKP1-212ENST00000523966 MEOX1P50221 254 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 KCNQ1P51787 676 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 SESN2P58004 480 aaPredicted RBP5.13□□□□□ -1.59
SKP1-212ENST00000523966 MESP2Q0VG99 397 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 LMBR1LQ6UX01 489 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 NOL8Q76FK4 1167 aaKnown RBP5.13□□□□□ -1.59
SKP1-212ENST00000523966 GLB1L2Q8IW92 636 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 RTKN2Q8IZC4 609 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 MIER2Q8N344 545 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 OR5AN1Q8NGI8 311 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 JPH3Q8WXH2 748 aaPredicted RBP5.13□□□□□ -1.59
SKP1-212ENST00000523966 FATE1Q969F0 183 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 CAMKK2Q96RR4 588 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 PCGF6Q9BYE7 350 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 TMEM168Q9H0V1 697 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 CSRNP2Q9H175 543 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 IFT122Q9HBG6 1241 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 BARX1Q9HBU1 254 aaPredicted RBP5.13□□□□□ -1.59
SKP1-212ENST00000523966 GOLGA6AQ9NYA3 693 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 CDC42EP3Q9UKI2 254 aa5.13□□□□□ -1.59
SKP1-212ENST00000523966 TSPAN6O43657 245 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 MAFO75444 373 aaPredicted RBP5.12□□□□□ -1.59
SKP1-212ENST00000523966 KNG1P01042 644 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 PLA2G1BP04054 148 aaKnown RBP5.12□□□□□ -1.59
SKP1-212ENST00000523966 C1QTNF9P0C862 333 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 AGXTP21549 392 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 POLD1P28340 1107 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 SLC16A1P53985 500 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 MLLT6P55198 1093 aaPredicted RBP5.12□□□□□ -1.59
SKP1-212ENST00000523966 SSPNQ14714 243 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 MUM1Q2TAK8 710 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 MBNL2Q5VZF2 373 aaKnown RBP5.12□□□□□ -1.59
SKP1-212ENST00000523966 KANK2Q63ZY3 851 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 RAVER1Q8IY67 606 aaKnown RBP5.12□□□□□ -1.59
SKP1-212ENST00000523966 MYO1HQ8N1T3 1032 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 CPA6Q8N4T0 437 aa5.12□□□□□ -1.59
SKP1-212ENST00000523966 PPM1NQ8N819 430 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms