RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 SCLT1Q96NL6 688 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 CNTNAP3BQ96NU0 1288 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 CNTNAP3Q9BZ76 1288 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 LNPKQ9C0E8 428 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 JADE2Q9NQC1 790 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 TCEAL9Q9UHQ7 104 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 DUSP12Q9UNI6 340 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 UBIAD1Q9Y5Z9 338 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 COL1A2P08123 1366 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 KMT2BQ9UMN6 2715 aaPredicted RBP10.62□□□□□ -0.71
PTPN12-216ENST00000523952 DDX39AO00148 427 aaKnown RBP10.61□□□□□ -0.71
PTPN12-216ENST00000523952 CFHP08603 1231 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 SDHBP21912 280 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 UBE2SQ16763 222 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 SLC35G1Q2M3R5 365 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 ZNF484Q5JVG2 852 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 SPECC1Q5M775 1068 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 FAM228AQ86W67 206 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 PPFIBP1Q86W92 1011 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 VPS52Q8N1B4 723 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 TMEM40Q8WWA1 233 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 CASD1Q96PB1 797 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 PCYT2Q99447 389 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 MRPL9Q9BYD2 267 aaKnown RBP10.61□□□□□ -0.71
PTPN12-216ENST00000523952 SFXN1Q9H9B4 322 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 CDHR5Q9HBB8 845 aa10.61□□□□□ -0.71
PTPN12-216ENST00000523952 NFASCO94856 1347 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 TPRP12270 2363 aaKnown RBP10.6□□□□□ -0.71
PTPN12-216ENST00000523952 CARNS1A5YM72 827 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 NT5C1B-RDH14C9J2C7 533 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 ZC3H11AO75152 810 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTPN12-216ENST00000523952 VTNP04004 478 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 EPCAMP16422 314 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 NPR3P17342 541 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 GBP2P32456 591 aaPredicted RBP10.6□□□□□ -0.71
PTPN12-216ENST00000523952 ZNF76P36508 570 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 BCAR1P56945 870 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 FAM189BP81408 668 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 TROAPQ12815 778 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 KANK3Q6NY19 840 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 PDXDC2PQ6P474 469 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 ELMSAN1Q6PJG2 1045 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 LRRC55Q6ZSA7 311 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 TRMT1LQ7Z2T5 733 aaKnown RBP10.6□□□□□ -0.71
PTPN12-216ENST00000523952 KIAA0319LQ8IZA0 1049 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 SLC39A11Q8N1S5 342 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 NCOA7Q8NI08 942 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 HELQQ8TDG4 1101 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 AUTS2Q8WXX7 1259 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 MAP7D2Q96T17 732 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 LZTS2Q9BRK4 669 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 SPZ1Q9BXG8 430 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 KCNK12Q9HB15 430 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 ZNF302Q9NR11 478 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 KCNH7Q9NS40 1196 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 IGSF9Q9P2J2 1179 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 NCDNQ9UBB6 729 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 CA14Q9ULX7 337 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 PCDHA6Q9UN73 950 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 AKT3Q9Y243 479 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 PCDHA8Q9Y5H6 950 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 DOCK6Q96HP0 2047 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 EPG5Q9HCE0 2579 aa10.6□□□□□ -0.71
PTPN12-216ENST00000523952 OTOGLQ3ZCN5 2332 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 KINO60870 393 aaKnown RBP10.59□□□□□ -0.71
PTPN12-216ENST00000523952 TMOD1P28289 359 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 GNAQP50148 359 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 RNASELQ05823 741 aaKnown RBP10.59□□□□□ -0.71
PTPN12-216ENST00000523952 TBC1D8BQ0IIM8 1120 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 RSPO4Q2I0M5 234 aaPredicted RBP10.59□□□□□ -0.71
PTPN12-216ENST00000523952 B4GALNT3Q6L9W6 998 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 NFXL1Q6ZNB6 911 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 ECHDC2Q86YB7 292 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 SPNS2Q8IVW8 549 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 RASEFQ8IZ41 740 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 STAMQ92783 540 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 SECISBP2LQ93073 1101 aaKnown RBP10.59□□□□□ -0.71
PTPN12-216ENST00000523952 MXRA8Q9BRK3 442 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 EMILIN2Q9BXX0 1053 aa10.59□□□□□ -0.71
PTPN12-216ENST00000523952 DNAH14Q0VDD8 3507 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 KLRC2P26717 231 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 POLGP54098 1239 aaPredicted RBP10.58□□□□□ -0.72
PTPN12-216ENST00000523952 NLRP11P59045 1033 aaKnown RBP10.58□□□□□ -0.72
PTPN12-216ENST00000523952 DSC3Q14574 896 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 LETM2Q2VYF4 491 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 MIS18BP1Q6P0N0 1132 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 CASC1Q6TDU7 716 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 HEATR3Q7Z4Q2 680 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 GPR149Q86SP6 731 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 ZNF654Q8IZM8 581 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 ZBP1Q9H171 429 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 TBC1D17Q9HA65 648 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 SENP2Q9HC62 589 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 DACT1Q9NYF0 836 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 WNT16Q9UBV4 365 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 CEP131Q9UPN4 1083 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 NCOR2Q9Y618 2525 aa10.58□□□□□ -0.72
PTPN12-216ENST00000523952 MAP1BP46821 2468 aaKnown RBP10.58□□□□□ -0.72
PTPN12-216ENST00000523952 PDCD11Q14690 1871 aaKnown RBP10.57□□□□□ -0.72
PTPN12-216ENST00000523952 ACACBO00763 2458 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms