RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 NLRP4Q96MN2 994 aa14.28□□□□□ -0.12
VEGFA-224ENST00000523873 SCLT1Q96NL6 688 aa14.28□□□□□ -0.12
VEGFA-224ENST00000523873 JPH2Q9BR39 696 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-224ENST00000523873 KDM3AQ9Y4C1 1321 aa14.28□□□□□ -0.12
VEGFA-224ENST00000523873 PPME1Q9Y570 386 aa14.28□□□□□ -0.12
VEGFA-224ENST00000523873 A0A087WZ62 844 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 GRXCR1A8MXD5 290 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 DGAT1O75907 488 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 EYA4O95677 639 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 RPLP2P05387 115 aaKnown RBP14.27□□□□□ -0.13
VEGFA-224ENST00000523873 SSBP05455 408 aaKnown RBP eCLIP14.27□□□□□ -0.13
VEGFA-224ENST00000523873 PFKMP08237 780 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 PLCG1P19174 1290 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 FGFR4P22455 802 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 FAM109BQ6ICB4 259 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-224ENST00000523873 TSHZ1Q6ZSZ6 1077 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 TMCO2Q7Z6W1 182 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-224ENST00000523873 RASSF8Q8NHQ8 419 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 ASAP3Q8TDY4 903 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 PRPF31Q8WWY3 499 aaKnown RBP14.27□□□□□ -0.13
VEGFA-224ENST00000523873 NLRP7Q8WX94 980 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 SEPT8Q92599 483 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 FDXACB1Q9BRP7 624 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-224ENST00000523873 RUSC1Q9BVN2 902 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 IFIH1Q9BYX4 1025 aaKnown RBP14.27□□□□□ -0.13
VEGFA-224ENST00000523873 POLR3FQ9H1D9 316 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-224ENST00000523873 DNM3Q9UQ16 869 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 RBM19Q9Y4C8 960 aaKnown RBP14.27□□□□□ -0.13
VEGFA-224ENST00000523873 MORC2Q9Y6X9 1032 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-224ENST00000523873 TTC3P53804 2025 aa14.27□□□□□ -0.13
VEGFA-224ENST00000523873 SOX1O00570 391 aaPredicted RBP14.26□□□□□ -0.13
VEGFA-224ENST00000523873 PPP6R2O75170 966 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 ACTN1P12814 892 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 DNM2P50570 870 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 CRYBB1P53674 252 aaPredicted RBP14.26□□□□□ -0.13
VEGFA-224ENST00000523873 NUCB2P80303 420 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 DEFB103AP81534 67 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 TPRNQ4KMQ1 711 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 HABP4Q5JVS0 413 aaKnown RBP14.26□□□□□ -0.13
VEGFA-224ENST00000523873 RASIP1Q5U651 963 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.26□□□□□ -0.132e-35■■■■■ 28
VEGFA-224ENST00000523873 FAM228AQ86W67 206 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 CALML4Q96GE6 196 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 PANK2Q9BZ23 570 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 CCSER1Q9C0I3 900 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 GDPD2Q9HCC8 539 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 ERVK-5Q9HDB9 667 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 BLOC1S4Q9NUP1 217 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 CFAP45Q9UL16 551 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 PCDHA7Q9UN72 937 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 COL4A3BPQ9Y5P4 624 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 NLRC5Q86WI3 1866 aa14.26□□□□□ -0.13
VEGFA-224ENST00000523873 FNDC1Q4ZHG4 1894 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-224ENST00000523873 KIAA1671Q9BY89 1806 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 A0A087X0B3 334 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 CUTAO60888 179 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 RPS6KA5O75582 802 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 PLA2G4BP0C869 781 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 SRGAP2CP0DJJ0 459 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 CYP11B2P19099 503 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 GLRA2P23416 452 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 ARL2P36404 184 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 WDR5P61964 334 aaKnown RBP14.25□□□□□ -0.13
VEGFA-224ENST00000523873 RAD51AP2Q09MP3 1159 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 LAMTOR4Q0VGL1 99 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 NFX1Q12986 1120 aaKnown RBP14.25□□□□□ -0.13
VEGFA-224ENST00000523873 PAK2Q13177 524 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 DHX8Q14562 1220 aaKnown RBP14.25□□□□□ -0.13
VEGFA-224ENST00000523873 MCM6Q14566 821 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 AXDND1Q5T1B0 1012 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-224ENST00000523873 FAM102BQ5T8I3 360 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 ATL3Q6DD88 541 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 SHC4Q6S5L8 630 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 LEO1Q8WVC0 666 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-224ENST00000523873 TCP11Q8WWU5 503 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 PSPC1Q8WXF1 523 aaKnown RBP14.25□□□□□ -0.13
VEGFA-224ENST00000523873 LINC01599Q8WXQ3 324 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 BSNDQ8WZ55 320 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 NT5C3AQ9H0P0 336 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 TMX1Q9H3N1 280 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 RCOR1Q9UKL0 485 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 PADI3Q9ULW8 664 aa14.25□□□□□ -0.13
VEGFA-224ENST00000523873 NPHP3-ACAD11A0A0J9YXS1 232 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 A0A1W2PPC1 479 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 GAS2O43903 313 aaKnown RBP14.24□□□□□ -0.13
VEGFA-224ENST00000523873 DARSP14868 501 aaKnown RBP14.24□□□□□ -0.13
VEGFA-224ENST00000523873 IBSPP21815 317 aaPredicted RBP14.24□□□□□ -0.13
VEGFA-224ENST00000523873 ME1P48163 572 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 RABGGTBP53611 331 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 SLC12A3P55017 1021 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 KRT85P78386 507 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 CACNB1Q02641 598 aaPredicted RBP14.24□□□□□ -0.13
VEGFA-224ENST00000523873 CAPSQ13938 189 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 IKBKEQ14164 716 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 RINT1Q6NUQ1 792 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 EXOC8Q8IYI6 725 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 PDILTQ8N807 584 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 SYT2Q8N9I0 419 aaPredicted RBP14.24□□□□□ -0.13
VEGFA-224ENST00000523873 RNF149Q8NC42 400 aa14.24□□□□□ -0.13
VEGFA-224ENST00000523873 KCNG4Q8TDN1 519 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms