RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 LINC01599Q8WXQ3 324 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 SLC7A3Q8WY07 619 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 HLA-CQ95604 372 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 ADAM2Q99965 735 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 HSD17B14Q9BPX1 270 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 PLVAPQ9BX97 442 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 TTC12Q9H892 705 aaPredicted RBP19.32■□□□□ 0.68
CCNC-213ENST00000523541 COG5Q9UP83 839 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 TTC3P53804 2025 aa19.32■□□□□ 0.68
CCNC-213ENST00000523541 FAM205CA6NFA0 338 aa19.31■□□□□ 0.68
CCNC-213ENST00000523541 SLITRK3O94933 977 aa19.31■□□□□ 0.68
CCNC-213ENST00000523541 XRCC6P12956 609 aaKnown RBP eCLIP19.31■□□□□ 0.68
CCNC-213ENST00000523541 ZSCAN20P17040 1043 aaPredicted RBP19.31■□□□□ 0.68
CCNC-213ENST00000523541 BMPR1AP36894 532 aa19.31■□□□□ 0.68
CCNC-213ENST00000523541 FOSBP53539 338 aa19.31■□□□□ 0.68
CCNC-213ENST00000523541 FAM228AQ86W67 206 aa19.31■□□□□ 0.68
CCNC-213ENST00000523541 GCOM2Q9BZD3 368 aaPredicted RBP19.31■□□□□ 0.68
CCNC-213ENST00000523541 CHST12Q9NRB3 414 aa19.31■□□□□ 0.68
CCNC-213ENST00000523541 CUL9Q8IWT3 2517 aa19.31■□□□□ 0.68
CCNC-213ENST00000523541 C9IYK1 514 aa19.3■□□□□ 0.68
CCNC-213ENST00000523541 ASAP2O43150 1006 aa19.3■□□□□ 0.68
CCNC-213ENST00000523541 CSPG5O95196 566 aa19.3■□□□□ 0.68
CCNC-213ENST00000523541 DARSP14868 501 aaKnown RBP19.3■□□□□ 0.68
CCNC-213ENST00000523541 YWHABP31946 246 aaKnown RBP19.3■□□□□ 0.68
CCNC-213ENST00000523541 GNL2Q13823 731 aaKnown RBP19.3■□□□□ 0.68
CCNC-213ENST00000523541 DSC3Q14574 896 aa19.3■□□□□ 0.68
CCNC-213ENST00000523541 PAN2Q504Q3 1202 aaKnown RBP19.3■□□□□ 0.68
CCNC-213ENST00000523541 NCAPH2Q6IBW4 605 aa19.3■□□□□ 0.68
CCNC-213ENST00000523541 NOSTRINQ8IVI9 506 aa19.3■□□□□ 0.68
CCNC-213ENST00000523541 ADAMTS19Q8TE59 1207 aa19.3■□□□□ 0.68
CCNC-213ENST00000523541 RSPH1Q8WYR4 309 aa19.3■□□□□ 0.68
CCNC-213ENST00000523541 CEP170P1Q96L14 293 aa19.3■□□□□ 0.68
CCNC-213ENST00000523541 LXNQ9BS40 222 aa19.3■□□□□ 0.68
CCNC-213ENST00000523541 C11orf84Q9BUA3 381 aaPredicted RBP19.3■□□□□ 0.68
CCNC-213ENST00000523541 LMAN2LQ9H0V9 348 aa19.3■□□□□ 0.68
CCNC-213ENST00000523541 DHX33Q9H6R0 707 aaKnown RBP19.3■□□□□ 0.68
CCNC-213ENST00000523541 SUCLA2Q9P2R7 463 aaPredicted RBP19.3■□□□□ 0.68
CCNC-213ENST00000523541 LOXHD1Q8IVV2 1947 aa19.29■□□□□ 0.68
CCNC-213ENST00000523541 VCANP13611 3396 aa19.29■□□□□ 0.68
CCNC-213ENST00000523541 U2AF2P26368 475 aaKnown RBP eCLIP19.29■□□□□ 0.68
CCNC-213ENST00000523541 TXKP42681 527 aa19.29■□□□□ 0.68
CCNC-213ENST00000523541 EP400NLQ6ZTU2 488 aa19.29■□□□□ 0.68
CCNC-213ENST00000523541 TCP11Q8WWU5 503 aa19.29■□□□□ 0.68
CCNC-213ENST00000523541 NLRP7Q8WX94 980 aa19.29■□□□□ 0.68
CCNC-213ENST00000523541 MRPL38Q96DV4 380 aaKnown RBP19.29■□□□□ 0.68
CCNC-213ENST00000523541 DYDC2Q96IM9 177 aa19.29■□□□□ 0.68
CCNC-213ENST00000523541 TBC1D32Q96NH3 1257 aa19.29■□□□□ 0.68
CCNC-213ENST00000523541 UHRF1Q96T88 793 aaPredicted RBP19.29■□□□□ 0.68
CCNC-213ENST00000523541 EIF2AK1Q9BQI3 630 aaKnown RBP19.29■□□□□ 0.68
CCNC-213ENST00000523541 ANKEF1Q9NU02 776 aa19.29■□□□□ 0.68
CCNC-213ENST00000523541 TMEM161AQ9NX61 479 aa19.29■□□□□ 0.68
CCNC-213ENST00000523541 NOL7Q9UMY1 257 aaKnown RBP19.29■□□□□ 0.68
CCNC-213ENST00000523541 EVPLQ92817 2033 aa19.29■□□□□ 0.68
CCNC-213ENST00000523541 HOXA2O43364 376 aa19.28■□□□□ 0.68
CCNC-213ENST00000523541 KCNQ1P51787 676 aa19.28■□□□□ 0.68
CCNC-213ENST00000523541 GUCY1B3Q02153 619 aa19.28■□□□□ 0.68
CCNC-213ENST00000523541 TIGD5Q53EQ6 642 aa19.28■□□□□ 0.68
CCNC-213ENST00000523541 SPOUT1Q5T280 376 aaKnown RBP19.28■□□□□ 0.68
CCNC-213ENST00000523541 TPH2Q8IWU9 490 aa19.28■□□□□ 0.68
CCNC-213ENST00000523541 P2RX5Q93086 422 aa19.28■□□□□ 0.68
CCNC-213ENST00000523541 ZNF668Q96K58 619 aaPredicted RBP19.28■□□□□ 0.68
CCNC-213ENST00000523541 TRAIPQ9BWF2 469 aa19.28■□□□□ 0.68
CCNC-213ENST00000523541 DACT1Q9NYF0 836 aa19.28■□□□□ 0.68
CCNC-213ENST00000523541 RGL1Q9NZL6 768 aa19.28■□□□□ 0.68
CCNC-213ENST00000523541 NLRC5Q86WI3 1866 aa19.27■□□□□ 0.68
CCNC-213ENST00000523541 MGEA5O60502 916 aa19.27■□□□□ 0.68
CCNC-213ENST00000523541 EOMESO95936 686 aa19.27■□□□□ 0.68
CCNC-213ENST00000523541 LINC00271P0C7V0 271 aa19.27■□□□□ 0.68
CCNC-213ENST00000523541 SFPQP23246 707 aaKnown RBP eCLIP19.27■□□□□ 0.68
CCNC-213ENST00000523541 POLGP54098 1239 aaPredicted RBP19.27■□□□□ 0.68
CCNC-213ENST00000523541 PCBP1Q15365 356 aaKnown RBP eCLIP19.27■□□□□ 0.68
CCNC-213ENST00000523541 TMX3Q96JJ7 454 aa19.27■□□□□ 0.68
CCNC-213ENST00000523541 ATP6V0A4Q9HBG4 840 aa19.27■□□□□ 0.68
CCNC-213ENST00000523541 WRAP73Q9P2S5 460 aaPredicted RBP19.27■□□□□ 0.68
CCNC-213ENST00000523541 STK24Q9Y6E0 443 aa19.27■□□□□ 0.68
CCNC-213ENST00000523541 WDR81Q562E7 1941 aa19.27■□□□□ 0.67
CCNC-213ENST00000523541 XIRP2A4UGR9 3374 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 SPTBN5Q9NRC6 3674 aaKnown RBP19.26■□□□□ 0.67
CCNC-213ENST00000523541 A0A0U1RQF3 1178 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 TMEM150BA6NC51 233 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 TNFRSF10AO00220 468 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 SKIP12755 728 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 MUTP22033 750 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 MCM7P33993 719 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 NPEPPSP55786 919 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 POU5F1BQ06416 359 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 CTTNQ14247 550 aaKnown RBP19.26■□□□□ 0.67
CCNC-213ENST00000523541 XKR9Q5GH70 373 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 RHPN2Q8IUC4 686 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 PSPC1Q8WXF1 523 aaKnown RBP19.26■□□□□ 0.67
CCNC-213ENST00000523541 TUFT1Q9NNX1 390 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 AAASQ9NRG9 546 aa19.26■□□□□ 0.67
CCNC-213ENST00000523541 RALGAPA2Q2PPJ7 1873 aa19.25■□□□□ 0.67
CCNC-213ENST00000523541 NCK2O43639 380 aa19.25■□□□□ 0.67
CCNC-213ENST00000523541 DGAT1O75907 488 aa19.25■□□□□ 0.67
CCNC-213ENST00000523541 DRP2Q13474 957 aa19.25■□□□□ 0.67
CCNC-213ENST00000523541 MXD4Q14582 209 aaPredicted RBP19.25■□□□□ 0.67
CCNC-213ENST00000523541 CSPP1Q1MSJ5 1256 aa19.25■□□□□ 0.67
CCNC-213ENST00000523541 TTC38Q5R3I4 469 aa19.25■□□□□ 0.67
CCNC-213ENST00000523541 PLA2G4FQ68DD2 849 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms