RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 C22orf23Q9BZE7 217 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 CHST12Q9NRB3 414 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 NRBP2Q9NSY0 501 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 BARX2Q9UMQ3 279 aaPredicted RBP10.63□□□□□ -0.71
SDC2-207ENST00000522911 GINS2Q9Y248 185 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 IRAK3Q9Y616 596 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 PLXNA4Q9HCM2 1894 aa10.63□□□□□ -0.71
SDC2-207ENST00000522911 LOXHD1Q8IVV2 1947 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 CYP3A7-CYP3A51PA0A087WV96 503 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 IGKV6-21A0A0C4DH24 114 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 TMEM221A6NGB7 291 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 M0R296 226 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 DDX39AO00148 427 aaKnown RBP10.62□□□□□ -0.71
SDC2-207ENST00000522911 EDIL3O43854 480 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 CDC45O75419 566 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 VTNP04004 478 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 OATP04181 439 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 DARSP14868 501 aaKnown RBP10.62□□□□□ -0.71
SDC2-207ENST00000522911 ZSCAN20P17040 1043 aaPredicted RBP10.62□□□□□ -0.71
SDC2-207ENST00000522911 CYP3A7P24462 503 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 HSPA4P34932 840 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 GPC3P51654 580 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 JAK3P52333 1124 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 NLRP11P59045 1033 aaKnown RBP10.62□□□□□ -0.71
SDC2-207ENST00000522911 KRT17Q04695 432 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 PRR16Q569H4 304 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 EFCAB12Q6NXP0 572 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 MOXD1Q6UVY6 613 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 LRRC55Q6ZSA7 311 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 ALYREFQ86V81 257 aaKnown RBP10.62□□□□□ -0.71
SDC2-207ENST00000522911 ECHDC2Q86YB7 292 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 CKAP2LQ8IYA6 745 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 THNSL1Q8IYQ7 743 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 FBXL6Q8N531 539 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 METTL13Q8N6R0 699 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 SLC5A5Q92911 643 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 ASIC4Q96FT7 647 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 TCEANC2Q96MN5 208 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 ZNF558Q96NG5 402 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 DISC1Q9NRI5 854 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 DACT1Q9NYF0 836 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 GABBR1Q9UBS5 961 aa10.62□□□□□ -0.71
SDC2-207ENST00000522911 ZDBF2Q9HCK1 2354 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 PSMD10O75832 226 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 FGFR1P11362 822 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 CLCN3P51790 818 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 PTPN5P54829 565 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 PRKCEQ02156 737 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 ITIH3Q06033 890 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 Q4G0T1 1027 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 SPOUT1Q5T280 376 aaKnown RBP10.61□□□□□ -0.71
SDC2-207ENST00000522911 ANKRD54Q6NXT1 300 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 SYCE2Q6PIF2 218 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 RBM23Q86U06 439 aaKnown RBP10.61□□□□□ -0.71
SDC2-207ENST00000522911 MRPL43Q8N983 215 aaKnown RBP10.61□□□□□ -0.71
SDC2-207ENST00000522911 MICAL1Q8TDZ2 1067 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 MBOAT7Q96N66 472 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 NECTIN4Q96NY8 510 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 CEP89Q96ST8 783 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 MRPL9Q9BYD2 267 aaKnown RBP10.61□□□□□ -0.71
SDC2-207ENST00000522911 NIFKQ9BYG3 293 aaKnown RBP10.61□□□□□ -0.71
SDC2-207ENST00000522911 IRF2BPLQ9H1B7 796 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 SPG21Q9NZD8 308 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 STK39Q9UEW8 545 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 PCDHGC5Q9Y5F6 944 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 CACNA1HO95180 2353 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 CFAP54Q96N23 3096 aa10.61□□□□□ -0.71
SDC2-207ENST00000522911 MYH9P35579 1960 aaKnown RBP10.6□□□□□ -0.71
SDC2-207ENST00000522911 ADAMTS3O15072 1205 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 MSH4O15457 936 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 ZNF623O75123 536 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 PPFIA3O75145 1194 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 SKIP12755 728 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 RPS6KB1P23443 525 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 POLGP54098 1239 aaPredicted RBP10.6□□□□□ -0.71
SDC2-207ENST00000522911 FGD1P98174 961 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 AKAP17AQ02040 695 aaKnown RBP10.6□□□□□ -0.71
SDC2-207ENST00000522911 APOBRQ0VD83 1088 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 PTPN21Q16825 1174 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 TPRNQ4KMQ1 711 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 XKR3Q5GH77 459 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 CLLU1OSQ5K130 101 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 GALNT17Q6IS24 598 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 BLOC1S2Q6QNY1 142 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 Q6ZUG5 572 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 ZNF410Q86VK4 478 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 SUGP1Q8IWZ8 645 aaKnown RBP10.6□□□□□ -0.71
SDC2-207ENST00000522911 ABI1Q8IZP0 508 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 SLC39A11Q8N1S5 342 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 DAGLBQ8NCG7 672 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 CASP10Q92851 521 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 BRF1Q92994 677 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 PBXIP1Q96AQ6 731 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 TCF25Q9BQ70 676 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 HCSTQ9UBK5 93 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 AKT3Q9Y243 479 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 NR2E1Q9Y466 385 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 PPME1Q9Y570 386 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 SNX14Q9Y5W7 946 aa10.6□□□□□ -0.71
SDC2-207ENST00000522911 EVPLQ92817 2033 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms