RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 CYP2C19P33261 490 aa17■□□□□ 0.31
CTNNA1-236ENST00000522792 PBX1P40424 430 aa17■□□□□ 0.31
CTNNA1-236ENST00000522792 ARMCX5Q6P1M9 558 aa17■□□□□ 0.31
CTNNA1-236ENST00000522792 HAUS6Q7Z4H7 955 aa17■□□□□ 0.31
CTNNA1-236ENST00000522792 AFG1LQ8WV93 481 aa17■□□□□ 0.31
CTNNA1-236ENST00000522792 TMEM143Q96AN5 459 aa17■□□□□ 0.31
CTNNA1-236ENST00000522792 CEP63Q96MT8 703 aa17■□□□□ 0.31
CTNNA1-236ENST00000522792 STRA6Q9BX79 667 aa17■□□□□ 0.31
CTNNA1-236ENST00000522792 ARHGAP39Q9C0H5 1083 aa17■□□□□ 0.31
CTNNA1-236ENST00000522792 ZSWIM8A7E2V4 1837 aa17■□□□□ 0.31
CTNNA1-236ENST00000522792 CETN3O15182 167 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 ADCY6O43306 1168 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 NR3C1P04150 777 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 TPM2P07951 284 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 HOXC6P09630 235 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 MAPTP10636 758 aaKnown RBP16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 RGS2P41220 211 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 NPTX2P47972 431 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 GSDMDP57764 484 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 DMP1Q13316 513 aaPredicted RBP16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 MIIPQ5JXC2 388 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 PLPPR4Q7Z2D5 763 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 LRRC8AQ8IWT6 810 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 ZC3H3Q8IXZ2 948 aaKnown RBP16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 SYCP3Q8IZU3 236 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 MSL3Q8N5Y2 521 aaKnown RBP16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 FAM167AQ96KS9 214 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 CEP89Q96ST8 783 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 GJD2Q9UKL4 321 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 RASSF10A6NK89 507 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 MSNP26038 577 aaKnown RBP16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 NCKAP1LP55160 1127 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 PLCB4Q15147 1175 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 TARBP2Q15633 366 aaKnown RBP16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 CEP135Q66GS9 1140 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 ZNF784Q8NCA9 323 aaPredicted RBP16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 SOCS4Q8WXH5 440 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 SLC7A3Q8WY07 619 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 SMARCAD1Q9H4L7 1026 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 DHX33Q9H6R0 707 aaKnown RBP16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 KMT5AQ9NQR1 393 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 CREBZFQ9NS37 354 aa16.99■□□□□ 0.31
CTNNA1-236ENST00000522792 ALDH1A1P00352 501 aa16.98■□□□□ 0.31
CTNNA1-236ENST00000522792 TBX2Q13207 712 aaPredicted RBP16.98■□□□□ 0.31
CTNNA1-236ENST00000522792 DUSP28Q4G0W2 176 aa16.98■□□□□ 0.31
CTNNA1-236ENST00000522792 OR6J1Q8NGC5 347 aa16.98■□□□□ 0.31
CTNNA1-236ENST00000522792 PPTC7Q8NI37 304 aa16.98■□□□□ 0.31
CTNNA1-236ENST00000522792 ATP8B4Q8TF62 1192 aa16.98■□□□□ 0.31
CTNNA1-236ENST00000522792 BBXQ8WY36 941 aaPredicted RBP16.98■□□□□ 0.31
CTNNA1-236ENST00000522792 APBA2Q99767 749 aa16.98■□□□□ 0.31
CTNNA1-236ENST00000522792 PYCARDQ9ULZ3 195 aa16.98■□□□□ 0.31
CTNNA1-236ENST00000522792 TRPC6Q9Y210 931 aa16.98■□□□□ 0.31
CTNNA1-236ENST00000522792 LGALS2P05162 132 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 ZNF286BP0CG31 522 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 YY1P25490 414 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 SMTNP53814 917 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 TNFAIP2Q03169 654 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 ALCAMQ13740 583 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 MAN2A1Q16706 1144 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 VWA3BQ502W6 1294 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 IQSEC1Q6DN90 963 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 HS2ST1Q7LGA3 356 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 CCDC150Q8NCX0 1101 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 EMID1Q96A84 441 aaPredicted RBP16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 ACCSQ96QU6 501 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 GBP3Q9H0R5 595 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 AGPAT3Q9NRZ7 376 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 ADGRA3Q8IWK6 1321 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 TISP43B9A030 160 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 TBC1D8O95759 1140 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 GNA14O95837 355 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 RFC5P40937 340 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 PSMC4P43686 418 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 APLP1P51693 650 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 GTF2BQ00403 316 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 TMEM161BQ8NDZ6 487 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 CPLX3Q8WVH0 158 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 TRAPPC12Q8WVT3 735 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 LENG1Q96BZ8 264 aaPredicted RBP16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 IFT74Q96LB3 600 aa16.97■□□□□ 0.31
CTNNA1-236ENST00000522792 MGAMO43451 1857 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 DENND3A2RUS2 1198 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 AKAP3O75969 853 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 RPL13P26373 211 aaKnown RBP16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 CASP4P49662 377 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 DNM2P50570 870 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 CYP2J2P51589 502 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 FCGRTP55899 365 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 TBC1D8BQ0IIM8 1120 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 ASAP3Q8TDY4 903 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 SPIRE2Q8WWL2 714 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 NDST4Q9H3R1 872 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 RNPEPQ9H4A4 650 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 ST6GALNAC4Q9H4F1 302 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 TMEM206Q9H813 350 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 C17orf75Q9HAS0 396 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 ERAP1Q9NZ08 941 aa16.96■□□□□ 0.31
CTNNA1-236ENST00000522792 ZBTB42B2RXF5 422 aa16.96■□□□□ 0.3
CTNNA1-236ENST00000522792 ZNF865P0CJ78 1059 aaPredicted RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms