RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 LRRC8CQ8TDW0 803 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 LXNQ9BS40 222 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 CPSF3Q9UKF6 684 aaKnown RBP17.4■□□□□ 0.38
USP42-207ENST00000521713 RPSAP08865 295 aaKnown RBP17.4■□□□□ 0.38
USP42-207ENST00000521713 EIF3BP55884 814 aaKnown RBP17.4■□□□□ 0.38
USP42-207ENST00000521713 FAM133AQ8N9E0 248 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 DENND3A2RUS2 1198 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 ARHGAP42A6NI28 874 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 DBN1Q16643 649 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 PANX2Q96RD6 677 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 NOP53Q9NZM5 478 aaKnown RBP17.4■□□□□ 0.38
USP42-207ENST00000521713 SEPT10Q9P0V9 454 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 ADAM21Q9UKJ8 722 aa17.4■□□□□ 0.38
USP42-207ENST00000521713 TXNP10599 105 aaKnown RBP17.39■□□□□ 0.37
USP42-207ENST00000521713 CETPP11597 493 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 ATF2P15336 505 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 TCP11X2Q5H9J9 407 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 BEST2Q8NFU1 509 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 IPO11Q9UI26 975 aaKnown RBP17.39■□□□□ 0.37
USP42-207ENST00000521713 ZNF609O15014 1411 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 TDP2O95551 362 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 RASA1P20936 1047 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 PDIA5Q14554 519 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 TTBK2Q6IQ55 1244 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 STOX1Q6ZVD7 989 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 RFX6Q8HWS3 928 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 OR6B3Q8NGW1 331 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 CCDC68Q9H2F9 335 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 JPH1Q9HDC5 661 aaPredicted RBP17.39■□□□□ 0.37
USP42-207ENST00000521713 MEGF6O75095 1541 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 GOLGA8CPA6NN73 597 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 NR3C1P04150 777 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 E2F5Q15329 346 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 KAZNQ674X7 775 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 MAP3K14Q99558 947 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 KDM4FA0A1W2PPD8 638 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 VPS41P49754 854 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 NCAPGQ9BPX3 1015 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 MRPL4Q9BYD3 311 aaKnown RBP17.39■□□□□ 0.37
USP42-207ENST00000521713 GDAQ9Y2T3 454 aa17.39■□□□□ 0.37
USP42-207ENST00000521713 HSPA6P17066 643 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 XPAP23025 273 aaPredicted RBP17.38■□□□□ 0.37
USP42-207ENST00000521713 CDC42EP1Q00587 391 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 TAF11Q15544 211 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 VSTM4Q8IW00 320 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 SMARCA1P28370 1054 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 ATP2C1P98194 919 aaPredicted RBP17.38■□□□□ 0.37
USP42-207ENST00000521713 TTC39CQ8N584 583 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 IGDCC4Q8TDY8 1250 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 TIPINQ9BVW5 301 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 TUFT1Q9NNX1 390 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 SLC16A4O15374 487 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 SRGAP2BP0DMP2 458 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 BAATQ14032 418 aaPredicted RBP17.38■□□□□ 0.37
USP42-207ENST00000521713 RHPN2Q8IUC4 686 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 EIF2AK1Q9BQI3 630 aaKnown RBP17.38■□□□□ 0.37
USP42-207ENST00000521713 GPBP1L1Q9HC44 474 aaPredicted RBP17.38■□□□□ 0.37
USP42-207ENST00000521713 PRR12Q9ULL5 1215 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 PDS5AQ29RF7 1337 aaKnown RBP17.38■□□□□ 0.37
USP42-207ENST00000521713 BAG2O95816 211 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 STAT5BP51692 787 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 HUNKP57058 714 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 COASYQ13057 564 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 PSMD6Q15008 389 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 E2F4Q16254 413 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 SAAL1Q96ER3 474 aa17.38■□□□□ 0.37
USP42-207ENST00000521713 EFNA5P52803 228 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 NNTQ13423 1086 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 KYAT1Q16773 422 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 KCTD16Q68DU8 428 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 ARHGEF18Q6ZSZ5 1173 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 TRIM42Q8IWZ5 723 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 URGCPQ8TCY9 931 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 AFG3L2Q9Y4W6 797 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 SPDYE16A6NNV3 312 aaPredicted RBP17.37■□□□□ 0.37
USP42-207ENST00000521713 MGEA5O60502 916 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 HUS1O60921 280 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 NR1D1P20393 614 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 PTPROQ16827 1216 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 KNOP1Q1ED39 458 aaKnown RBP17.37■□□□□ 0.37
USP42-207ENST00000521713 SPDYE2Q495Y8 402 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 POTEFA5A3E0 1075 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 TBX3O15119 743 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 POTEIP0CG38 1075 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 KRT10P13645 584 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 POTEGQ6S5H5 508 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 POTEEQ6S8J3 1075 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 DONSONQ9NYP3 566 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 SCINQ9Y6U3 715 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 HEXIM1O94992 359 aaKnown RBP17.37■□□□□ 0.37
USP42-207ENST00000521713 LMNAP02545 664 aaKnown RBP17.37■□□□□ 0.37
USP42-207ENST00000521713 KRT31Q15323 416 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 MUM1L1Q5H9M0 696 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 SCARA5Q6ZMJ2 495 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 SAMD7Q7Z3H4 446 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 CDKL2Q92772 493 aa17.37■□□□□ 0.37
USP42-207ENST00000521713 MAGOHBQ96A72 148 aaKnown RBP17.37■□□□□ 0.37
USP42-207ENST00000521713 FRMD3A2A2Y4 597 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 SRGNP10124 158 aa17.36■□□□□ 0.37
USP42-207ENST00000521713 TMEM39BQ9GZU3 492 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms