RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 EYA4O95677 639 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 FAM86B2P0C5J1 330 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 SLURP2P0DP57 97 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 GAP43P17677 238 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 HNRNPH3P31942 346 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 NOS2P35228 1153 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 PMS1P54277 932 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 TUBB4BP68371 445 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 ZBED6P86452 979 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 FKBP3Q00688 224 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 UBXN1Q04323 297 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 USH1GQ495M9 461 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 CEP55Q53EZ4 464 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 PRR16Q569H4 304 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 ANKRD40Q6AI12 368 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 TRIM65Q6PJ69 517 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 B3GNT9Q6UX72 402 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 LRRC55Q6ZSA7 311 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 KCNK18Q7Z418 384 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 CCDC170Q8IYT3 715 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 OR8K1Q8NGG5 319 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 ANKRD7Q92527 254 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 PLIN2Q99541 437 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 P2RX7Q99572 595 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 FEZ1Q99689 392 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 SLF1Q9BQI6 1058 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 ZNF341Q9BYN7 854 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 CRISPLD1Q9H336 500 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 SEMA6BQ9H3T3 888 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 AS3MTQ9HBK9 375 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 OLFML3Q9NRN5 406 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 PANK4Q9NVE7 773 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 ZNHIT6Q9NWK9 470 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 DNAI1Q9UI46 699 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 FAM184BQ9ULE4 1060 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 PCDHA2Q9Y5H9 948 aa7.41□□□□□ -1.22
CTNNA1-228ENST00000521640 MEIS1O00470 390 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 EIF3DO15371 548 aaKnown RBP eCLIP7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 MED24O75448 989 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 SLU7O95391 586 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 SPATA31C1P0DKV0 1188 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 FCER1AP12319 257 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 CASP14P31944 242 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 KRT9P35527 623 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 ZNF76P36508 570 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 MTIF2P46199 727 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 FXR1P51114 621 aaKnown RBP eCLIP7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 PRELPP51888 382 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 ADKP55263 362 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 EPHA7Q15375 998 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 ECM1Q16610 540 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 NBPF9Q3BBW0 867 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 VWA3BQ502W6 1294 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 HSP90AA4PQ58FG1 418 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 MIIPQ5JXC2 388 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 KIAA1755Q5JYT7 1200 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 NOL9Q5SY16 702 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 GPBP1Q86WP2 473 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 LDHDQ86WU2 507 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 CATSPER3Q86XQ3 398 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 SCYL3Q8IZE3 742 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 SPICE1Q8N0Z3 855 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 ZNF397Q8NF99 534 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 TMEM174Q8WUU8 243 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 HSD17B14Q9BPX1 270 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 HINFPQ9BQA5 517 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 NOC4LQ9BVI4 516 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 TIPINQ9BVW5 301 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 VPS16Q9H269 839 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 SLC38A10Q9HBR0 1119 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 TRMT1Q9NXH9 659 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 ODF2LQ9ULJ1 636 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 PPP1R9AQ9ULJ8 1098 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 NOVA2Q9UNW9 492 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 ZNF232Q9UNY5 417 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 TRAF3IP3Q9Y228 551 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 LUC7L2Q9Y383 392 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 DAAM1Q9Y4D1 1078 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 ZNF536O15090 1300 aa7.4□□□□□ -1.22
CTNNA1-228ENST00000521640 PAPPA2Q9BXP8 1791 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 ATP8B3O60423 1300 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 SERTM1A2A2V5 107 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 C19orf81C9J6K1 198 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 PDXKO00764 312 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 ATP2A1O14983 1001 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 SLC16A3O15427 465 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 ZBTB7AO95365 584 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 LYPLA2O95372 231 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 CFBP00751 764 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 MAPTP10636 758 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 IDEP14735 1019 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 CYLC1P35663 651 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 GMPSP49915 693 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 ZNF131P52739 623 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 KRT83P78385 493 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 INSM1Q01101 510 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 TBC1D8BQ0IIM8 1120 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 ALCAMQ13740 583 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 MYBPC2Q14324 1141 aa7.39□□□□□ -1.23
CTNNA1-228ENST00000521640 TKFCQ3LXA3 575 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms