RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 C1orf112Q9NSG2 853 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 CA14Q9ULX7 337 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 ARID2Q68CP9 1835 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 DSPP15924 2871 aaKnown RBP9.16□□□□□ -0.94
CSMD1-209ENST00000520630 LOC400499M0QZD8 3231 aa9.16□□□□□ -0.94
CSMD1-209ENST00000520630 HIP1O00291 1037 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 SGSM2O43147 1006 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 B4GALT3O60512 393 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 RPS6KA5O75582 802 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 CXCL14O95715 111 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 TBC1D8BQ0IIM8 1120 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 SPECC1Q5M775 1068 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 CASC1Q6TDU7 716 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 C1orf210Q8IVY1 113 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 SLC44A3Q8N4M1 653 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 GLG1Q92896 1179 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 ZNF558Q96NG5 402 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 HINFPQ9BQA5 517 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 TMEM117Q9H0C3 514 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 SPG21Q9NZD8 308 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 PKD2L1Q9P0L9 805 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 PUF60Q9UHX1 559 aaKnown RBP9.15□□□□□ -0.94
CSMD1-209ENST00000520630 FBXL21Q9UKT6 434 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 UBIAD1Q9Y5Z9 338 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 IRAK3Q9Y616 596 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 LAMA5O15230 3695 aa9.15□□□□□ -0.94
CSMD1-209ENST00000520630 PNMA6FA0A0J9YX94 578 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 DENND3A2RUS2 1198 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 GPR32O75388 356 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 ATP4AP20648 1035 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 KLRC1P26715 233 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 GRM4Q14833 912 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 VARS2Q5ST30 1063 aaKnown RBP9.14□□□□□ -0.95
CSMD1-209ENST00000520630 PHLDB3Q6NSJ2 640 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 XRRA1Q6P2D8 792 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 CWC27Q6UX04 472 aaKnown RBP9.14□□□□□ -0.95
CSMD1-209ENST00000520630 ZNF598Q86UK7 904 aaKnown RBP9.14□□□□□ -0.95
CSMD1-209ENST00000520630 IQCA1Q86XH1 822 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 NME8Q8N427 588 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 GPR152Q8TDT2 470 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 GPRASP2Q96D09 838 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 TBC1D32Q96NH3 1257 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 MYADMQ96S97 322 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 PPP1R16BQ96T49 567 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 FOXQ1Q9C009 403 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 ATP6V0A4Q9HBG4 840 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 MYO16Q9Y6X6 1858 aa9.14□□□□□ -0.95
CSMD1-209ENST00000520630 GCN1Q92616 2671 aaKnown RBP9.14□□□□□ -0.95
CSMD1-209ENST00000520630 IGKV6D-21A0A0A0MT36 114 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 PIK3CDO00329 1044 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 EIF5BO60841 1220 aaKnown RBP9.13□□□□□ -0.95
CSMD1-209ENST00000520630 LILRB3O75022 631 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 LILRB5O75023 590 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 ATG7O95352 703 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 RPLP2P05387 115 aaKnown RBP9.13□□□□□ -0.95
CSMD1-209ENST00000520630 CTSAP10619 480 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 METAP2P50579 478 aaKnown RBP eCLIP9.13□□□□□ -0.95
CSMD1-209ENST00000520630 BCAR1P56945 870 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 KRT17Q04695 432 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 LETM2Q2VYF4 491 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 KIAA0319Q5VV43 1072 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 ECHDC2Q86YB7 292 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 VPS52Q8N1B4 723 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 GIMAP8Q8ND71 665 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-209ENST00000520630 ST13P5Q8NFI4 369 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-209ENST00000520630 NELL1Q92832 810 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 ACSF2Q96CM8 615 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-209ENST00000520630 OSMRQ99650 979 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 LSG1Q9H089 658 aaKnown RBP9.13□□□□□ -0.95
CSMD1-209ENST00000520630 RNF41Q9H4P4 317 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-209ENST00000520630 DZANK1Q9NVP4 752 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 IGSF9Q9P2J2 1179 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 GINS2Q9Y248 185 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 SIT1Q9Y3P8 196 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 MTF2Q9Y483 593 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-209ENST00000520630 BPTFQ12830 3046 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 IGF2RP11717 2491 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 SMG1Q96Q15 3661 aaKnown RBP9.13□□□□□ -0.95
CSMD1-209ENST00000520630 ADAMTS20P59510 1910 aa9.13□□□□□ -0.95
CSMD1-209ENST00000520630 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-209ENST00000520630 M0QZ92 97 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 STK25O00506 426 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 ZNF213O14771 459 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 EPB41L2O43491 1005 aaKnown RBP9.12□□□□□ -0.95
CSMD1-209ENST00000520630 SRFP11831 508 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 PPM1AP35813 382 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 RBM25P49756 843 aaKnown RBP9.12□□□□□ -0.95
CSMD1-209ENST00000520630 CLCN4P51793 760 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 TROAPQ12815 778 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 ITGB3BPQ13352 177 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-209ENST00000520630 KIZQ2M2Z5 673 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 CCDC178Q5BJE1 867 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 CCDC149Q6ZUS6 474 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 OTOP3Q7RTS5 596 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 PLPPR4Q7Z2D5 763 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 NLRX1Q86UT6 975 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 LRRC43Q8N309 656 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 ZBTB44Q8NCP5 570 aa9.12□□□□□ -0.95
CSMD1-209ENST00000520630 PJA1Q8NG27 643 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms