RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 KBTBD13C9JR72 458 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 MYO1CO00159 1063 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 PJA2O43164 708 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 GOLGA6DP0CG33 693 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 GCFC2P16383 781 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 ADORA2AP29274 412 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 SHMT1P34896 483 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 ADCY7P51828 1080 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 KIF11P52732 1056 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 GRB14Q14449 540 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 IFI16Q16666 785 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 LETM2Q2VYF4 491 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 ZNF697Q5TEC3 545 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 KRT79Q5XKE5 535 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 CENPPQ6IPU0 288 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 C8orf74Q6P047 294 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 NCAPG2Q86XI2 1143 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 SPATS2Q86XZ4 545 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 EFCAB13Q8IY85 973 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 SPICE1Q8N0Z3 855 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 LARP4BQ92615 738 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 LPAR1Q92633 364 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 CAPZA3Q96KX2 299 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 C12orf42Q96LP6 360 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 GUCD1Q96NT3 240 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 MMS19Q96T76 1030 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 TMEM47Q9BQJ4 181 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 COL25A1Q9BXS0 654 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 MOV10L1Q9BXT6 1211 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 KIAA1683Q9H0B3 1180 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 TMEM60Q9H2L4 133 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 SCUBE2Q9NQ36 999 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 GOLGA6AQ9NYA3 693 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 LRWD1Q9UFC0 647 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 FEZ2Q9UHY8 353 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 PLAGL2Q9UPG8 496 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 PCDHA13Q9Y5I0 950 aa9.47□□□□□ -0.89
CTNNA1-223ENST00000520520 A0A0U1RQJ8 604 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 MACROD2A1Z1Q3 448 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 LRRIQ3A6PVS8 624 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 DNM1LO00429 736 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 ENC1O14682 589 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 ERCC3P19447 782 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 ANXA13P27216 316 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 MAGEA1P43355 309 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 MAGEA9P43362 315 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 PAK2Q13177 524 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 PDIA5Q14554 519 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 SHHQ15465 462 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 TRIM60Q495X7 471 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 CFAP221Q4G0U5 840 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 DNAJC21Q5F1R6 531 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 C9orf50Q5SZB4 431 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 C10orf76Q5T2E6 689 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 ANKRD40Q6AI12 368 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 MCTP2Q6DN12 878 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 CCNI2Q6ZMN8 369 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 C16orf86Q6ZW13 317 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 IFT20Q8IY31 132 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 SLC44A5Q8NCS7 719 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 NEDD1Q8NHV4 660 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 RASGRP4Q8TDF6 673 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 AENQ8WTP8 325 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 ATRIPQ8WXE1 791 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 CAVIN3Q969G5 261 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 DYNLL2Q96FJ2 89 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 CEP63Q96MT8 703 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 NT5C3AQ9H0P0 336 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 EHD4Q9H223 541 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 NDST4Q9H3R1 872 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 CEP72Q9P209 647 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 ATP8B3O60423 1300 aa9.46□□□□□ -0.9
CTNNA1-223ENST00000520520 VCANP13611 3396 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 A0A1W2PRG0 241 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 PP2D1A8MPX8 630 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 RNF225M0QZC1 329 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 MSCO60682 206 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 SHOX2O60902 331 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 COBLO75128 1261 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 FLOT1O75955 427 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 PRPF6O94906 941 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 SERPING1P05155 500 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 EPB41P11171 864 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 CYBAP13498 195 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 HOXB3P14651 431 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 ADCYAP1R1P41586 468 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 PMS1P54277 932 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 TNNC1P63316 161 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 C2orf54Q08AI8 447 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 TTC31Q49AM3 519 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 CCDC40Q4G0X9 1142 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 TDRD12Q587J7 1177 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 MIIPQ5JXC2 388 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 KIAA1755Q5JYT7 1200 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 PDXDC1Q6P996 788 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 MICALCLQ6ZW33 695 aa9.45□□□□□ -0.9
CTNNA1-223ENST00000520520 FMNL3Q8IVF7 1028 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms