RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 STBD1O95210 358 aa15.82■□□□□ 0.12
VEGFA-221ENST00000520265 SRGAP2CP0DJJ0 459 aa15.82■□□□□ 0.12
VEGFA-221ENST00000520265 EIF4BP23588 611 aaKnown RBP15.82■□□□□ 0.12
VEGFA-221ENST00000520265 RFC5P40937 340 aa15.82■□□□□ 0.12
VEGFA-221ENST00000520265 HTRA4P83105 476 aaPredicted RBP15.82■□□□□ 0.12
VEGFA-221ENST00000520265 ORC2Q13416 577 aaPredicted RBP15.82■□□□□ 0.12
VEGFA-221ENST00000520265 EMC2Q15006 297 aa15.82■□□□□ 0.12
VEGFA-221ENST00000520265 SPOUT1Q5T280 376 aaKnown RBP15.82■□□□□ 0.12
VEGFA-221ENST00000520265 NPAS4Q8IUM7 802 aa15.82■□□□□ 0.12
VEGFA-221ENST00000520265 KSR1Q8IVT5 923 aa15.82■□□□□ 0.12
VEGFA-221ENST00000520265 EXOC8Q8IYI6 725 aa15.82■□□□□ 0.12
VEGFA-221ENST00000520265 ZNF579Q8NAF0 562 aaKnown RBP15.82■□□□□ 0.12
VEGFA-221ENST00000520265 PIGOQ8TEQ8 1089 aa15.82■□□□□ 0.12
VEGFA-221ENST00000520265 PSPC1Q8WXF1 523 aaKnown RBP15.82■□□□□ 0.12
VEGFA-221ENST00000520265 MTRQ99707 1265 aa15.82■□□□□ 0.12
VEGFA-221ENST00000520265 FDXACB1Q9BRP7 624 aaPredicted RBP15.82■□□□□ 0.12
VEGFA-221ENST00000520265 TSPYL2Q9H2G4 693 aaPredicted RBP15.82■□□□□ 0.12
VEGFA-221ENST00000520265 ADGRA3Q8IWK6 1321 aa15.82■□□□□ 0.12
VEGFA-221ENST00000520265 COL6A3P12111 3177 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 MGEA5O60502 916 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 USO1O60763 962 aaKnown RBP15.81■□□□□ 0.12
VEGFA-221ENST00000520265 SLITRK3O94933 977 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 SFPQP23246 707 aaKnown RBP eCLIP15.81■□□□□ 0.12
VEGFA-221ENST00000520265 COL4A4P53420 1690 aaPredicted RBP15.81■□□□□ 0.12
VEGFA-221ENST00000520265 GRB10Q13322 594 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 MAEAQ7L5Y9 396 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 ZNF710Q8N1W2 664 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 LINC01465Q8N7H1 131 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 TCP11Q8WWU5 503 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 ADAMTS10Q9H324 1103 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 C1orf112Q9NSG2 853 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 PCDHB6Q9Y5E3 794 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 COL4A3BPQ9Y5P4 624 aa15.81■□□□□ 0.12
VEGFA-221ENST00000520265 DARSP14868 501 aaKnown RBP15.8■□□□□ 0.12
VEGFA-221ENST00000520265 U2AF2P26368 475 aaKnown RBP eCLIP15.8■□□□□ 0.122e-48■□□□□ 11.2
VEGFA-221ENST00000520265 CCT6AP40227 531 aaKnown RBP15.8■□□□□ 0.12
VEGFA-221ENST00000520265 SARSP49591 514 aaKnown RBP15.8■□□□□ 0.12
VEGFA-221ENST00000520265 GATMP50440 423 aa15.8■□□□□ 0.12
VEGFA-221ENST00000520265 ERVK-21P61565 698 aa15.8■□□□□ 0.12
VEGFA-221ENST00000520265 PTGDRQ13258 359 aa15.8■□□□□ 0.12
VEGFA-221ENST00000520265 ZRSR1Q15695 479 aaKnown RBP15.8■□□□□ 0.12
VEGFA-221ENST00000520265 HAUS3Q68CZ6 603 aa15.8■□□□□ 0.12
VEGFA-221ENST00000520265 POTEGQ6S5H5 508 aa15.8■□□□□ 0.12
VEGFA-221ENST00000520265 CATSPER4Q7RTX7 472 aa15.8■□□□□ 0.12
VEGFA-221ENST00000520265 RTN4RL1Q86UN2 441 aaPredicted RBP15.8■□□□□ 0.12
VEGFA-221ENST00000520265 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.8■□□□□ 0.126e-13■□□□□ 9.7
VEGFA-221ENST00000520265 RAB34Q9BZG1 259 aa15.8■□□□□ 0.12
VEGFA-221ENST00000520265 ATP6V0A4Q9HBG4 840 aa15.8■□□□□ 0.12
VEGFA-221ENST00000520265 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
VEGFA-221ENST00000520265 PPME1Q9Y570 386 aa15.8■□□□□ 0.12
VEGFA-221ENST00000520265 TBKBP1A7MCY6 615 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 HSP90AA1P07900 732 aaKnown RBP15.79■□□□□ 0.12
VEGFA-221ENST00000520265 CDC42EP1Q00587 391 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 EPC2Q52LR7 807 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 RILPL1Q5EBL4 403 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 SLC24A5Q71RS6 500 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 ZNF410Q86VK4 478 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 TMEM192Q8IY95 271 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 ABI1Q8IZP0 508 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 PRPF31Q8WWY3 499 aaKnown RBP15.79■□□□□ 0.12
VEGFA-221ENST00000520265 SAMD11Q96NU1 681 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 INO80BQ9C086 356 aaPredicted RBP15.79■□□□□ 0.12
VEGFA-221ENST00000520265 TUFT1Q9NNX1 390 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 LRWD1Q9UFC0 647 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 PIN4Q9Y237 131 aaKnown RBP15.79■□□□□ 0.12
VEGFA-221ENST00000520265 ARID2Q68CP9 1835 aa15.79■□□□□ 0.12
VEGFA-221ENST00000520265 IGKV6-21A0A0C4DH24 114 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 ARHGEF35A5YM69 484 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 GAS2O43903 313 aaKnown RBP15.78■□□□□ 0.12
VEGFA-221ENST00000520265 MED24O75448 989 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 DGKIO75912 1065 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 TOB1P50616 345 aaPredicted RBP15.78■□□□□ 0.12
VEGFA-221ENST00000520265 LAMTOR4Q0VGL1 99 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 GPM6BQ13491 265 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 TWF2Q6IBS0 349 aaKnown RBP15.78■□□□□ 0.12
VEGFA-221ENST00000520265 DTHD1Q6ZMT9 781 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 FERMT3Q86UX7 667 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 HSCBQ8IWL3 235 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 RNF149Q8NC42 400 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 SP7Q8TDD2 431 aaPredicted RBP15.78■□□□□ 0.12
VEGFA-221ENST00000520265 SNX29Q8TEQ0 813 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 CEP89Q96ST8 783 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 HSD17B14Q9BPX1 270 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 DHX33Q9H6R0 707 aaKnown RBP15.78■□□□□ 0.12
VEGFA-221ENST00000520265 RGS18Q9NS28 235 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 ANKEF1Q9NU02 776 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 CHD9Q3L8U1 2897 aa15.78■□□□□ 0.12
VEGFA-221ENST00000520265 K7ELQ4 463 aaPredicted RBP15.77■□□□□ 0.12
VEGFA-221ENST00000520265 DGAT1O75907 488 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 ERLIN2O94905 339 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 FGFR1P11362 822 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 PDCP20941 246 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 RARRES1P49788 294 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 TFDP1Q14186 410 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 PTPROQ16827 1216 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 LONRF3Q496Y0 759 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 FAM102BQ5T8I3 360 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 CATSPER3Q86XQ3 398 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 NACC1Q96RE7 527 aa15.77■□□□□ 0.12
VEGFA-221ENST00000520265 POLR3FQ9H1D9 316 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms