RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 APBA1Q02410 837 aa20.24■□□□□ 0.83
FAM49B-214ENST00000519540 TCERG1LQ5VWI1 586 aa20.24■□□□□ 0.83
FAM49B-214ENST00000519540 DPY19L2P1Q6NXN4 242 aa20.24■□□□□ 0.83
FAM49B-214ENST00000519540 SLC17A8Q8NDX2 589 aa20.24■□□□□ 0.83
FAM49B-214ENST00000519540 TMEM174Q8WUU8 243 aa20.24■□□□□ 0.83
FAM49B-214ENST00000519540 NUCKS1Q9H1E3 243 aaKnown RBP20.24■□□□□ 0.83
FAM49B-214ENST00000519540 ZNF408Q9H9D4 720 aa20.24■□□□□ 0.83
FAM49B-214ENST00000519540 PDLIM7Q9NR12 457 aa20.24■□□□□ 0.83
FAM49B-214ENST00000519540 FRMD4BQ9Y2L6 1034 aa20.24■□□□□ 0.83
FAM49B-214ENST00000519540 SYNGAP1Q96PV0 1343 aa20.24■□□□□ 0.83
FAM49B-214ENST00000519540 IGSF9BQ9UPX0 1349 aa20.24■□□□□ 0.83
FAM49B-214ENST00000519540 PLEKP08567 350 aaPredicted RBP20.23■□□□□ 0.83
FAM49B-214ENST00000519540 SYN2Q92777 582 aaPredicted RBP20.23■□□□□ 0.83
FAM49B-214ENST00000519540 CCDC42Q96M95 316 aa20.23■□□□□ 0.83
FAM49B-214ENST00000519540 GANQ9H2C0 597 aa20.23■□□□□ 0.83
FAM49B-214ENST00000519540 MAFBQ9Y5Q3 323 aaPredicted RBP20.23■□□□□ 0.83
FAM49B-214ENST00000519540 ARID2Q68CP9 1835 aa20.23■□□□□ 0.83
FAM49B-214ENST00000519540 PGK2P07205 417 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 SLC9A1P19634 815 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 UBA1P22314 1058 aaKnown RBP20.22■□□□□ 0.83
FAM49B-214ENST00000519540 XKR3Q5GH77 459 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 ZNF526Q8TF50 670 aaPredicted RBP20.22■□□□□ 0.83
FAM49B-214ENST00000519540 KIFAP3Q92845 792 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 PLCB1Q9NQ66 1216 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 CYP26B1Q9NR63 512 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 CGNQ9P2M7 1197 aaKnown RBP20.22■□□□□ 0.83
FAM49B-214ENST00000519540 SEPT9Q9UHD8 586 aaPredicted RBP20.22■□□□□ 0.83
FAM49B-214ENST00000519540 DNAJC25-GNG10A0A024R161 153 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 DGAT1O75907 488 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 URI1O94763 535 aaPredicted RBP20.22■□□□□ 0.83
FAM49B-214ENST00000519540 TGFB3P10600 412 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 EXOC3L4Q17RC7 722 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 ZNF662Q6ZS27 426 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 C12orf56Q8IXR9 622 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 FGD4Q96M96 766 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 MROH8Q9H579 483 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 C17orf75Q9HAS0 396 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 ZNF302Q9NR11 478 aa20.22■□□□□ 0.83
FAM49B-214ENST00000519540 IGKV6D-21A0A0A0MT36 114 aa20.21■□□□□ 0.83
FAM49B-214ENST00000519540 GTPBP10A4D1E9 387 aaKnown RBP20.21■□□□□ 0.83
FAM49B-214ENST00000519540 SOCS7O14512 581 aa20.21■□□□□ 0.83
FAM49B-214ENST00000519540 EXOC3O60645 756 aa20.21■□□□□ 0.83
FAM49B-214ENST00000519540 SLU7O95391 586 aaKnown RBP20.21■□□□□ 0.83
FAM49B-214ENST00000519540 ATP4AP20648 1035 aa20.21■□□□□ 0.83
FAM49B-214ENST00000519540 PON1P27169 355 aa20.21■□□□□ 0.83
FAM49B-214ENST00000519540 NPTX2P47972 431 aa20.21■□□□□ 0.83
FAM49B-214ENST00000519540 SMTNP53814 917 aa20.21■□□□□ 0.83
FAM49B-214ENST00000519540 KCTD2Q14681 263 aa20.21■□□□□ 0.83
FAM49B-214ENST00000519540 TMEM161BQ8NDZ6 487 aa20.21■□□□□ 0.83
FAM49B-214ENST00000519540 MMP19Q99542 508 aa20.21■□□□□ 0.83
FAM49B-214ENST00000519540 NTPCRQ9BSD7 190 aaKnown RBP20.21■□□□□ 0.83
FAM49B-214ENST00000519540 HAUS4Q9H6D7 363 aa20.21■□□□□ 0.83
FAM49B-214ENST00000519540 ZNF215Q9UL58 517 aaPredicted RBP20.21■□□□□ 0.83
FAM49B-214ENST00000519540 MYH9P35579 1960 aaKnown RBP20.21■□□□□ 0.83
FAM49B-214ENST00000519540 CCDC169A6NNP5 214 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 FARP2O94887 1054 aaPredicted RBP20.2■□□□□ 0.83
FAM49B-214ENST00000519540 IPO7O95373 1038 aaKnown RBP20.2■□□□□ 0.83
FAM49B-214ENST00000519540 ACTN1P12814 892 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 EIF4A3P38919 411 aaKnown RBP20.2■□□□□ 0.83
FAM49B-214ENST00000519540 SNRPFP62306 86 aaKnown RBP20.2■□□□□ 0.83
FAM49B-214ENST00000519540 ERVK-9P63128 1117 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 DMP1Q13316 513 aaPredicted RBP20.2■□□□□ 0.83
FAM49B-214ENST00000519540 NEDD9Q14511 834 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 ZNF569Q5MCW4 686 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 SFMBT2Q5VUG0 894 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 GBP6Q6ZN66 633 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 MCPH1Q8NEM0 835 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 SPIRE2Q8WWL2 714 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 BSNDQ8WZ55 320 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 MPHOSPH6Q99547 160 aaKnown RBP20.2■□□□□ 0.83
FAM49B-214ENST00000519540 XPNPEP1Q9NQW7 623 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 MYO1AQ9UBC5 1043 aa20.2■□□□□ 0.83
FAM49B-214ENST00000519540 LRRC37A2A6NM11 1700 aa20.2■□□□□ 0.82
FAM49B-214ENST00000519540 GSTTP1A0A1W2PQM5 241 aa20.2■□□□□ 0.82
FAM49B-214ENST00000519540 TISP43B9A030 160 aa20.2■□□□□ 0.82
FAM49B-214ENST00000519540 TLR2O60603 784 aa20.2■□□□□ 0.82
FAM49B-214ENST00000519540 CYP2C8P10632 490 aa20.2■□□□□ 0.82
FAM49B-214ENST00000519540 SOX10P56693 466 aa20.2■□□□□ 0.82
FAM49B-214ENST00000519540 PPP2R5AQ15172 486 aa20.2■□□□□ 0.82
FAM49B-214ENST00000519540 KLHDC7AQ5VTJ3 777 aa20.2■□□□□ 0.82
FAM49B-214ENST00000519540 HGSNATQ68CP4 663 aa20.2■□□□□ 0.82
FAM49B-214ENST00000519540 EEPD1Q7L9B9 569 aa20.2■□□□□ 0.82
FAM49B-214ENST00000519540 PNMA3Q9UL41 463 aa20.2■□□□□ 0.82
FAM49B-214ENST00000519540 ZNF263O14978 683 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 LCA5LO95447 670 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 RTP1P59025 263 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 CYP27A1Q02318 531 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 MAPK8IP2Q13387 824 aaPredicted RBP20.19■□□□□ 0.82
FAM49B-214ENST00000519540 SHCBP1Q8NEM2 672 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 HVCN1Q96D96 273 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 MS4A4AQ96JQ5 239 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 PCIF1Q9H4Z3 704 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 ATP6V0A4Q9HBG4 840 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 KMT5AQ9NQR1 393 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 TRIM10Q9UDY6 481 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 TBX20Q9UMR3 447 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 OATP04181 439 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 UCHL3P15374 230 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 KIF11P52732 1056 aa20.19■□□□□ 0.82
FAM49B-214ENST00000519540 MTERF2Q49AM1 385 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms