RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PLA2G4FQ68DD2 849 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 TPH2Q8IWU9 490 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 C8orf76Q96K31 380 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 MAP7D2Q96T17 732 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 EIF2AK1Q9BQI3 630 aaKnown RBP10.48□□□□□ -0.73
HDAC3-215ENST00000519474 TMEM60Q9H2L4 133 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 TTC12Q9H892 705 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-215ENST00000519474 CYP26B1Q9NR63 512 aa10.48□□□□□ -0.73
HDAC3-215ENST00000519474 SEPT9Q9UHD8 586 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-215ENST00000519474 A0A087WWV3 80 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 A0A087WZ62 844 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 DENND3A2RUS2 1198 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 DKC1O60832 514 aaKnown RBP eCLIP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 CD2BP2O95400 341 aaKnown RBP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 ATP2B1P20020 1258 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 DNM2P50570 870 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 HMGN5P82970 282 aaKnown RBP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 RABEP1Q15276 862 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 SKIV2LQ15477 1246 aaKnown RBP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 ZNF174Q15697 407 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 CALCRLQ16602 461 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 TJAP1Q5JTD0 557 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 NCAPH2Q6IBW4 605 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 KSR1Q8IVT5 923 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 CMTR2Q8IYT2 770 aaKnown RBP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 C4orf32Q8N8J7 132 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 MRPL38Q96DV4 380 aaKnown RBP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 CEP170P1Q96L14 293 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 FDXACB1Q9BRP7 624 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 FOXP1Q9H334 677 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 DHX33Q9H6R0 707 aaKnown RBP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 ELAC1Q9H777 363 aaKnown RBP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 ZSWIM4Q9H7M6 989 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 C1orf112Q9NSG2 853 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 SUCLA2Q9P2R7 463 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 THEGQ9P2T0 379 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 LRFN2Q9ULH4 789 aa10.47□□□□□ -0.73
HDAC3-215ENST00000519474 MRPL42Q9Y6G3 142 aaKnown RBP10.47□□□□□ -0.73
HDAC3-215ENST00000519474 CDH23Q9H251 3354 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 GRM6O15303 877 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 LYPLA2O95372 231 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 SPATA31C1P0DKV0 1188 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 ZSCAN20P17040 1043 aaPredicted RBP10.46□□□□□ -0.73
HDAC3-215ENST00000519474 U2AF2P26368 475 aaKnown RBP eCLIP10.46□□□□□ -0.736e-7■■■■■ 29.6
HDAC3-215ENST00000519474 YWHABP31946 246 aaKnown RBP10.46□□□□□ -0.73
HDAC3-215ENST00000519474 MCM7P33993 719 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 CYP4A11Q02928 519 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 CAMK1Q14012 370 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 SAFBQ15424 915 aaKnown RBP eCLIP10.46□□□□□ -0.73
HDAC3-215ENST00000519474 PAN2Q504Q3 1202 aaKnown RBP10.46□□□□□ -0.73
HDAC3-215ENST00000519474 OTUD6AQ7L8S5 288 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 RHPN2Q8IUC4 686 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 SPPL3Q8TCT6 385 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 SYMPKQ92797 1274 aaKnown RBP10.46□□□□□ -0.73
HDAC3-215ENST00000519474 HLA-CQ95604 372 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 TMX3Q96JJ7 454 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 LXNQ9BS40 222 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 PLVAPQ9BX97 442 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 GCOM2Q9BZD3 368 aaPredicted RBP10.46□□□□□ -0.73
HDAC3-215ENST00000519474 IFT122Q9HBG6 1241 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 RNF19AQ9NV58 838 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 TMEM161AQ9NX61 479 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 COG5Q9UP83 839 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 PLAGL2Q9UPG8 496 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 ADGRA3Q8IWK6 1321 aa10.46□□□□□ -0.73
HDAC3-215ENST00000519474 A0A0U1RQF3 1178 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 NEMFO60524 1076 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 XRCC6P12956 609 aaKnown RBP eCLIP10.45□□□□□ -0.74
HDAC3-215ENST00000519474 IBSPP21815 317 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-215ENST00000519474 TOB1P50616 345 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-215ENST00000519474 XKR9Q5GH70 373 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 LRRC55Q6ZSA7 311 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 ECHDC2Q86YB7 292 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 EXOC8Q8IYI6 725 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 FAM184AQ8NB25 1140 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 IL27Q8NEV9 243 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 PRPF31Q8WWY3 499 aaKnown RBP10.45□□□□□ -0.74
HDAC3-215ENST00000519474 NLRP7Q8WX94 980 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 P2RX5Q93086 422 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 TMEM143Q96AN5 459 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 CASD1Q96PB1 797 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 JPH2Q9BR39 696 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-215ENST00000519474 INO80BQ9C086 356 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-215ENST00000519474 ZMYND15Q9H091 742 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 ATP6V0A4Q9HBG4 840 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 ALG13Q9NP73 1137 aaKnown RBP10.45□□□□□ -0.74
HDAC3-215ENST00000519474 CHST12Q9NRB3 414 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 ANKEF1Q9NU02 776 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 TYW1Q9NV66 732 aaKnown RBP10.45□□□□□ -0.74
HDAC3-215ENST00000519474 RWDD3Q9Y3V2 267 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 PPME1Q9Y570 386 aa10.45□□□□□ -0.74
HDAC3-215ENST00000519474 COL4A6Q14031 1691 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 TBKBP1A7MCY6 615 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 ASAP2O43150 1006 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 EOMESO95936 686 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 ITGB1P05556 798 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 SRGAP2CP0DJJ0 459 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 FGFR1P11362 822 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 DNAJB1P25685 340 aa10.44□□□□□ -0.74
HDAC3-215ENST00000519474 CTNNB1P35222 781 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms