RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	TEX13B	Q9BXU2	312 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	TMEM206	Q9H813	350 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	SNX12	Q9UMY4	172 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	FRMD4B	Q9Y2L6	1034 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	LOC285556	D6RIA3	1793 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	TMEM150B	A6NC51	233 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	RGS20	O76081	388 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	PNMA6A	P0CW24	399 aa	Predicted RBP	13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	LMNB1	P20700	586 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	CYP2J2	P51589	502 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	GTF2B	Q00403	316 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	ARID5A	Q03989	594 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	PTK2	Q05397	1052 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	NLRX1	Q86UT6	975 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	SYCP3	Q8IZU3	236 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	RPGRIP1	Q96KN7	1286 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	DRC1	Q96MC2	740 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	ALS2CR12	Q96Q35	445 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	SPAG5	Q96R06	1193 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	PNKP	Q96T60	521 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	MMS19	Q96T76	1030 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	LUC7L	Q9NQ29	371 aa	Known RBP	13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	CYP39A1	Q9NYL5	469 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	TMOD4	Q9NZQ9	345 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	ADAMTS1	Q9UHI8	967 aa		13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.53	□□□□□ -0.24
SPIDR-210	ENST00000519362	WDR90	Q96KV7	1748 aa		13.52	□□□□□ -0.24
SPIDR-210	ENST00000519362	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	USP2	O75604	605 aa	Predicted RBP	13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	SEC31A	O94979	1220 aa	Known RBP	13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	KCNA2	P16389	499 aa		13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	ANXA13	P27216	316 aa		13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	CKAP4	Q07065	602 aa	Known RBP	13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	KRT222	Q8N1A0	295 aa		13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	NOX5	Q96PH1	765 aa		13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	SH2D3A	Q9BRG2	576 aa		13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	ACAD9	Q9H845	621 aa		13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	ARFGAP3	Q9NP61	516 aa		13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	A1CF	Q9NQ94	594 aa	Known RBP	13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	HOXC10	Q9NYD6	342 aa		13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	PCDHA10	Q9Y5I2	948 aa		13.52	□□□□□ -0.25
SPIDR-210	ENST00000519362	EXOC3	O60645	756 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	TBC1D8	O95759	1140 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	NCKAP1L	P55160	1127 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	BFSP1	Q12934	665 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	NAB2	Q15742	525 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	CBWD6	Q4V339	395 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	CBWD3	Q5JTY5	395 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	CBWD5	Q5RIA9	395 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	C10orf76	Q5T2E6	689 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	UTP14C	Q5TAP6	766 aa	Known RBP	13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	IQCE	Q6IPM2	695 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	ANO5	Q75V66	913 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	CREG2	Q8IUH2	290 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	ANKRD13C	Q8N6S4	541 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	ACCS	Q96QU6	501 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	TCEAL9	Q9UHQ7	104 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	NENF	Q9UMX5	172 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	PAPPA2	Q9BXP8	1791 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	ATP8B3	O60423	1300 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	NFASC	O94856	1347 aa		13.51	□□□□□ -0.25
SPIDR-210	ENST00000519362	PDE2A	O00408	941 aa	Predicted RBP	13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	ZNF185	O15231	689 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	STAM2	O75886	525 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	STBD1	O95210	358 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	TUBB	P07437	444 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	NPEPPS	P55786	919 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	MCCD1	P59942	119 aa	Predicted RBP	13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	SNRPF	P62306	86 aa	Known RBP	13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	PLS1	Q14651	629 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	XKR9	Q5GH70	373 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	PLA2G4F	Q68DD2	849 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	HAUS6	Q7Z4H7	955 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	SLC17A8	Q8NDX2	589 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	CCDC43	Q96MW1	224 aa	Known RBP	13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	GPRC5C	Q9NQ84	441 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	SNCAIP	Q9Y6H5	919 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	BTNL10	A8MVZ5	291 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	MAPK13	O15264	365 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	RHOXF2B	P0C7M4	288 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	TRIM49	P0CI25	452 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	TRIM49C	P0CI26	452 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	KLRC1	P26715	233 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	VGLL4	Q14135	290 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	GJB7	Q6PEY0	223 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	CDHR1	Q96JP9	859 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	CAPZA3	Q96KX2	299 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	IWS1	Q96ST2	819 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	RHOXF2	Q9BQY4	288 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	TLR10	Q9BXR5	811 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	STK33	Q9BYT3	514 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	DAAM1	Q9Y4D1	1078 aa		13.5	□□□□□ -0.25
SPIDR-210	ENST00000519362	PCDHGC5	Q9Y5F6	944 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms