RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 PIK3CDO00329 1044 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 MAFGO15525 162 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 ATP9AO75110 1047 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 SP9P0CG40 484 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 ARP10275 920 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 CA8P35219 290 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 MTMR1Q13613 665 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 PLCB4Q15147 1175 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 MTHFD1LQ6UB35 978 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 LRRC55Q6ZSA7 311 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 PLPPR4Q7Z2D5 763 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 CABP7Q86V35 215 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 PPFIBP1Q86W92 1011 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 SLC39A11Q8N1S5 342 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 DCLK2Q8N568 766 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 ANKK1Q8NFD2 765 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 RIN2Q8WYP3 895 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 ZFRQ96KR1 1074 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 PCYT2Q99447 389 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 EPAS1Q99814 870 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 CNNM2Q9H8M5 875 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 SFXN1Q9H9B4 322 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 KCNK12Q9HB15 430 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 SALL3Q9BXA9 1300 aa7.4□□□□□ -1.22
CTNNA1-214ENST00000519116 TTC3P53804 2025 aa7.4□□□□□ -1.23
CTNNA1-214ENST00000519116 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 PRR5-ARHGAP8B1AHC4 643 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 KINO60870 393 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 EPCAMP16422 314 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 ITGB5P18084 799 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 PBX3P40426 434 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 ALDH7A1P49419 539 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 SLC26A2P50443 739 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 STAT5BP51692 787 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 CRYBB1P53674 252 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 POLGP54098 1239 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 ATXN1P54253 815 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 ARHGAP8P85298 464 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 DSC3Q14574 896 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 GRM4Q14833 912 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 IMMTQ16891 758 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 SLC35G1Q2M3R5 365 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 PHLDB3Q6NSJ2 640 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 USP17L6PQ6QN14 398 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 TMC5Q6UXY8 1006 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 GPR149Q86SP6 731 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 FAM228AQ86W67 206 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 C1orf210Q8IVY1 113 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 KIAA0319LQ8IZA0 1049 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 VPS52Q8N1B4 723 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 SLC22A17Q8WUG5 538 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 TRAPPC12Q8WVT3 735 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 TMEM40Q8WWA1 233 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 SECISBP2LQ93073 1101 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 TMEM169Q96HH4 297 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 TBC1D17Q9HA65 648 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 JPH1Q9HDC5 661 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 RNF19AQ9NV58 838 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 PKD2L1Q9P0L9 805 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 SLC9A2Q9UBY0 812 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 CDV3Q9UKY7 258 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 IRAK3Q9Y616 596 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 DMXL1Q9Y485 3027 aa7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 EP300Q09472 2414 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-214ENST00000519116 NLRC5Q86WI3 1866 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 KRBA1A5PL33 1030 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 MEIS2O14770 477 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 SPTLC1O15269 473 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 CYTH3O43739 400 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 NARSO43776 548 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 HBP1O60381 514 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 CFHP08603 1231 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 CTSAP10619 480 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 SRFP11831 508 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 ZSCAN20P17040 1043 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 KLRC1P26715 233 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 PDE1AP54750 535 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 LMNB2Q03252 620 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 SEC23AQ15436 765 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 LETM2Q2VYF4 491 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 SPECC1Q5M775 1068 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 C20orf194Q5TEA3 1177 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 KANK3Q6NY19 840 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 C15orf39Q6ZRI6 1047 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 ECHDC2Q86YB7 292 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 SUMF1Q8NBK3 374 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 RSPH1Q8WYR4 309 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 STAMQ92783 540 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 NXPE3Q969Y0 559 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 SDF4Q9BRK5 362 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 RTKNQ9BST9 563 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 MRPL9Q9BYD2 267 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 ZBP1Q9H171 429 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 CDHR5Q9HBB8 845 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 JADE2Q9NQC1 790 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 NCDNQ9UBB6 729 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 SIT1Q9Y3P8 196 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 UBIAD1Q9Y5Z9 338 aa7.38□□□□□ -1.23
CTNNA1-214ENST00000519116 DCNP07585 359 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-214ENST00000519116 METAP2P50579 478 aaKnown RBP eCLIP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms