RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 EIF4BP23588 611 aaKnown RBP24.48■■□□□ 1.51
VEGFA-217ENST00000518538 LONP1P36776 959 aaKnown RBP24.48■■□□□ 1.51
VEGFA-217ENST00000518538 HYIQ5T013 277 aa24.48■■□□□ 1.51
VEGFA-217ENST00000518538 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.48■■□□□ 1.51
VEGFA-217ENST00000518538 MICAL3Q7RTP6 2002 aa24.48■■□□□ 1.51
VEGFA-217ENST00000518538 ZNF668Q96K58 619 aaPredicted RBP24.48■■□□□ 1.51
VEGFA-217ENST00000518538 FTHL17Q9BXU8 183 aa24.48■■□□□ 1.51
VEGFA-217ENST00000518538 PBX4Q9BYU1 374 aa24.48■■□□□ 1.51
VEGFA-217ENST00000518538 ERVK-5Q9HDB9 667 aa24.48■■□□□ 1.51
VEGFA-217ENST00000518538 COL4A3BPQ9Y5P4 624 aa24.48■■□□□ 1.51
VEGFA-217ENST00000518538 ARHGEF35A5YM69 484 aa24.47■■□□□ 1.51
VEGFA-217ENST00000518538 SLC26A4O43511 780 aa24.47■■□□□ 1.51
VEGFA-217ENST00000518538 DARSP14868 501 aaKnown RBP24.47■■□□□ 1.51
VEGFA-217ENST00000518538 DNAJB2P25686 324 aa24.47■■□□□ 1.51
VEGFA-217ENST00000518538 MARCKSP29966 332 aaPredicted RBP24.47■■□□□ 1.51
VEGFA-217ENST00000518538 NASPP49321 788 aaPredicted RBP24.47■■□□□ 1.51
VEGFA-217ENST00000518538 GRIN1Q05586 938 aa24.47■■□□□ 1.51
VEGFA-217ENST00000518538 NFX1Q12986 1120 aaKnown RBP24.47■■□□□ 1.51
VEGFA-217ENST00000518538 SLC39A14Q15043 492 aa24.47■■□□□ 1.51
VEGFA-217ENST00000518538 RAB30Q15771 203 aa24.47■■□□□ 1.51
VEGFA-217ENST00000518538 FAM228AQ86W67 206 aa24.47■■□□□ 1.51
VEGFA-217ENST00000518538 HERC6Q8IVU3 1022 aa24.47■■□□□ 1.51
VEGFA-217ENST00000518538 KCTD17Q8N5Z5 321 aa24.47■■□□□ 1.51
VEGFA-217ENST00000518538 PRPF31Q8WWY3 499 aaKnown RBP24.47■■□□□ 1.51
VEGFA-217ENST00000518538 GCOM2Q9BZD3 368 aaPredicted RBP24.47■■□□□ 1.51
VEGFA-217ENST00000518538 NT5C3AQ9H0P0 336 aa24.47■■□□□ 1.51
VEGFA-217ENST00000518538 LOXHD1Q8IVV2 1947 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 MYH15Q9Y2K3 1946 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 A0A087WZ62 844 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.46■■□□□ 1.51
VEGFA-217ENST00000518538 ASAP2O43150 1006 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 PBX2P40425 430 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 CABP7Q86V35 215 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 MYOCDQ8IZQ8 938 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 NLRP4Q96MN2 994 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 FDXACB1Q9BRP7 624 aaPredicted RBP24.46■■□□□ 1.51
VEGFA-217ENST00000518538 BHMT2Q9H2M3 363 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 MSRAQ9UJ68 235 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 FBXO2Q9UK22 296 aaPredicted RBP24.46■■□□□ 1.51
VEGFA-217ENST00000518538 ST3GAL5Q9UNP4 418 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 DNM3Q9UQ16 869 aa24.46■■□□□ 1.51
VEGFA-217ENST00000518538 SRPRBQ9Y5M8 271 aaKnown RBP24.46■■□□□ 1.51
VEGFA-217ENST00000518538 EYA4O95677 639 aa24.45■■□□□ 1.5
VEGFA-217ENST00000518538 RABGGTBP53611 331 aa24.45■■□□□ 1.5
VEGFA-217ENST00000518538 LAMTOR4Q0VGL1 99 aa24.45■■□□□ 1.5
VEGFA-217ENST00000518538 MXD4Q14582 209 aaPredicted RBP24.45■■□□□ 1.5
VEGFA-217ENST00000518538 PADI6Q6TGC4 694 aa24.45■■□□□ 1.5
VEGFA-217ENST00000518538 KSR1Q8IVT5 923 aa24.45■■□□□ 1.5
VEGFA-217ENST00000518538 MCPH1Q8NEM0 835 aa24.45■■□□□ 1.5
VEGFA-217ENST00000518538 CDK5RAP3Q96JB5 506 aa24.45■■□□□ 1.5
VEGFA-217ENST00000518538 TMX1Q9H3N1 280 aa24.45■■□□□ 1.5
VEGFA-217ENST00000518538 PCDHA11Q9Y5I1 949 aa24.45■■□□□ 1.5
VEGFA-217ENST00000518538 PTPRSQ13332 1948 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 E9PMD0 336 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 ENPP3O14638 875 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 BRD1O95696 1058 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 CYP11B2P19099 503 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 ARL2P36404 184 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 UBA7P41226 1012 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 GRB10Q13322 594 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 ZRSR1Q15695 479 aaKnown RBP24.44■■□□□ 1.5
VEGFA-217ENST00000518538 TMCO2Q7Z6W1 182 aaPredicted RBP24.44■■□□□ 1.5
VEGFA-217ENST00000518538 LINC00301Q8NCQ3 95 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 LINC01599Q8WXQ3 324 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 PNMA5Q96PV4 448 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 INO80BQ9C086 356 aaPredicted RBP24.44■■□□□ 1.5
VEGFA-217ENST00000518538 CSRNP2Q9H175 543 aa24.44■■□□□ 1.5
VEGFA-217ENST00000518538 TSPYL2Q9H2G4 693 aaPredicted RBP24.44■■□□□ 1.5
VEGFA-217ENST00000518538 TMEM265A0A087WTH1 108 aa24.43■■□□□ 1.5
VEGFA-217ENST00000518538 GJB5O95377 273 aa24.43■■□□□ 1.5
VEGFA-217ENST00000518538 STK38Q15208 465 aa24.43■■□□□ 1.5
VEGFA-217ENST00000518538 TMEM119Q4V9L6 283 aa24.43■■□□□ 1.5
VEGFA-217ENST00000518538 ATL3Q6DD88 541 aa24.43■■□□□ 1.5
VEGFA-217ENST00000518538 KCNK18Q7Z418 384 aa24.43■■□□□ 1.5
VEGFA-217ENST00000518538 TOP1MTQ969P6 601 aa24.43■■□□□ 1.5
VEGFA-217ENST00000518538 TIFAQ96CG3 184 aa24.43■■□□□ 1.5
VEGFA-217ENST00000518538 CALML4Q96GE6 196 aa24.43■■□□□ 1.5
VEGFA-217ENST00000518538 POLR3FQ9H1D9 316 aaPredicted RBP24.43■■□□□ 1.5
VEGFA-217ENST00000518538 IFT122Q9HBG6 1241 aa24.43■■□□□ 1.5
VEGFA-217ENST00000518538 TFIP11Q9UBB9 837 aaKnown RBP24.43■■□□□ 1.5
VEGFA-217ENST00000518538 YBX2Q9Y2T7 364 aaKnown RBP24.43■■□□□ 1.5
VEGFA-217ENST00000518538 YEATS4O95619 227 aa24.42■■□□□ 1.5
VEGFA-217ENST00000518538 SRGAP2CP0DJJ0 459 aa24.42■■□□□ 1.5
VEGFA-217ENST00000518538 TFDP1Q14186 410 aa24.42■■□□□ 1.5
VEGFA-217ENST00000518538 ZNF697Q5TEC3 545 aa24.42■■□□□ 1.5
VEGFA-217ENST00000518538 RTN4RL1Q86UN2 441 aaPredicted RBP24.42■■□□□ 1.5
VEGFA-217ENST00000518538 KRI1Q8N9T8 703 aaKnown RBP24.42■■□□□ 1.5
VEGFA-217ENST00000518538 RNF149Q8NC42 400 aa24.42■■□□□ 1.5
VEGFA-217ENST00000518538 ASAP3Q8TDY4 903 aa24.42■■□□□ 1.5
VEGFA-217ENST00000518538 ZBED2Q9BTP6 218 aa24.42■■□□□ 1.5
VEGFA-217ENST00000518538 CCSER1Q9C0I3 900 aa24.42■■□□□ 1.5
VEGFA-217ENST00000518538 TLL1O43897 1013 aa24.41■■□□□ 1.5
VEGFA-217ENST00000518538 MYOGP15173 224 aa24.41■■□□□ 1.5
VEGFA-217ENST00000518538 SFPQP23246 707 aaKnown RBP eCLIP24.41■■□□□ 1.5
VEGFA-217ENST00000518538 GLRA2P23416 452 aa24.41■■□□□ 1.5
VEGFA-217ENST00000518538 POU5F1BQ06416 359 aa24.41■■□□□ 1.5
VEGFA-217ENST00000518538 FOXD4L6Q3SYB3 417 aaPredicted RBP24.41■■□□□ 1.5
VEGFA-217ENST00000518538 FOXD4L3Q6VB84 417 aaPredicted RBP24.41■■□□□ 1.5
VEGFA-217ENST00000518538 MAEAQ7L5Y9 396 aa24.41■■□□□ 1.5
VEGFA-217ENST00000518538 SRGAP1Q7Z6B7 1085 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms