RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 FAM26DQ5JW98 314 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 IFIT1BQ5T764 474 aaKnown RBP8.37□□□□□ -1.07
PVT1-206ENST00000517838 SGMS1Q86VZ5 419 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 SMRP1Q8NCR6 262 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 KCNG4Q8TDN1 519 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 IGDCC4Q8TDY8 1250 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 APBB2Q92870 758 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 GPKOWQ92917 476 aaPredicted RBP eCLIP8.37□□□□□ -1.07
PVT1-206ENST00000517838 ZNF689Q96CS4 500 aaPredicted RBP8.37□□□□□ -1.07
PVT1-206ENST00000517838 ASIC4Q96FT7 647 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 USP28Q96RU2 1077 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 PDCD2LQ9BRP1 358 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 SENP2Q9HC62 589 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.37□□□□□ -1.07
PVT1-206ENST00000517838 MRPL11Q9Y3B7 192 aaKnown RBP8.37□□□□□ -1.07
PVT1-206ENST00000517838 TECTAO75443 2155 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 YEATS4O95619 227 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 GLP2RO95838 553 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 CHRNA1P02708 482 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 LGALS2P05162 132 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 CALM1P0DP23 149 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 CALM2P0DP24 149 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 CALM3P0DP25 149 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 TGFB3P10600 412 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 FDPSP14324 419 aaKnown RBP8.36□□□□□ -1.07
PVT1-206ENST00000517838 MSNP26038 577 aaKnown RBP8.36□□□□□ -1.07
PVT1-206ENST00000517838 CDC27P30260 824 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 AVPR2P30518 371 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 NDUFV1P49821 464 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 FOXK2Q01167 660 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 GHRHRQ02643 423 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 TYRO3Q06418 890 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 COASYQ13057 564 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 UVSSAQ2YD98 709 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 KCNV1Q6PIU1 500 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 ADGRD2Q7Z7M1 963 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 DGKHQ86XP1 1220 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 CKAP2LQ8IYA6 745 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 EFHBQ8N7U6 833 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 FBXO18Q8NFZ0 1043 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 IL31RAQ8NI17 732 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 CTCFLQ8NI51 663 aaPredicted RBP8.36□□□□□ -1.07
PVT1-206ENST00000517838 SPPL3Q8TCT6 385 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 MRPS27Q92552 414 aaKnown RBP8.36□□□□□ -1.07
PVT1-206ENST00000517838 ATOH1Q92858 354 aaPredicted RBP8.36□□□□□ -1.07
PVT1-206ENST00000517838 PPP1R9BQ96SB3 815 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 ZSCAN10Q96SZ4 725 aaPredicted RBP8.36□□□□□ -1.07
PVT1-206ENST00000517838 MTA3Q9BTC8 594 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 PLVAPQ9BX97 442 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 EHMT1Q9H9B1 1298 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 JMJD4Q9H9V9 463 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 VAT1LQ9HCJ6 419 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 BRMS1Q9HCU9 246 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 CCDC39Q9UFE4 941 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 RWDD3Q9Y3V2 267 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 TELO2Q9Y4R8 837 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 COL4A6Q14031 1691 aa8.36□□□□□ -1.07
PVT1-206ENST00000517838 ADGRA3Q8IWK6 1321 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 H0Y858 1186 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 SPTLC2O15270 562 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 PPP1R11O60927 126 aaPredicted RBP8.35□□□□□ -1.07
PVT1-206ENST00000517838 DGKIO75912 1065 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 DDAH1O94760 285 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 DEXIO95424 95 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 ITGB1P05556 798 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 GHRP10912 638 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 IFNAR1P17181 557 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 HOXA13P31271 388 aaPredicted RBP8.35□□□□□ -1.07
PVT1-206ENST00000517838 RCAN1P53805 252 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 SIGLEC14Q08ET2 396 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 BTG3Q14201 252 aaPredicted RBP8.35□□□□□ -1.07
PVT1-206ENST00000517838 LPIN1Q14693 890 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 PGM5Q15124 567 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 BRICD5Q6PL45 260 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 RNF19BQ6ZMZ0 732 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 TRIM50Q86XT4 487 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 CRIPAKQ8N1N5 446 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 CCDC82Q8N4S0 544 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 PNMA1Q8ND90 353 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 P2RX5Q93086 422 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 PGBD1Q96JS3 809 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 RPGRIP1Q96KN7 1286 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 AIFM3Q96NN9 605 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 SPSB2Q99619 263 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 PHF7Q9BWX1 381 aaPredicted RBP8.35□□□□□ -1.07
PVT1-206ENST00000517838 KAT14Q9H8E8 782 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 MLXIPQ9HAP2 919 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 TLR9Q9NR96 1032 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 RBM28Q9NW13 759 aaKnown RBP8.35□□□□□ -1.07
PVT1-206ENST00000517838 RTEL1Q9NZ71 1219 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 RCOR1Q9UKL0 485 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 USP15Q9Y4E8 981 aaPredicted RBP8.35□□□□□ -1.07
PVT1-206ENST00000517838 NID2Q14112 1375 aa8.35□□□□□ -1.07
PVT1-206ENST00000517838 SIP14410 1827 aa8.34□□□□□ -1.07
PVT1-206ENST00000517838 TRIP12Q14669 1992 aaPredicted RBP8.34□□□□□ -1.07
PVT1-206ENST00000517838 ESPNB1AK53 854 aa8.34□□□□□ -1.07
PVT1-206ENST00000517838 PROB1E7EW31 1015 aa8.34□□□□□ -1.07
PVT1-206ENST00000517838 S1PR4O95977 384 aa8.34□□□□□ -1.07
PVT1-206ENST00000517838 GNAT1P11488 350 aa8.34□□□□□ -1.07
PVT1-206ENST00000517838 ICAM3P32942 547 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms