RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 MKNK2Q9HBH9 465 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 RMND1Q9NWS8 449 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 UBAP1Q9NZ09 502 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 PDP2Q9P2J9 529 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 PCSK1NQ9UHG2 260 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 SCOCQ9UIL1 159 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 VAV3Q9UKW4 847 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 CFAP45Q9UL16 551 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 FAM184BQ9ULE4 1060 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 PLAGL2Q9UPG8 496 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 PRELID1Q9Y255 219 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 LUC7L2Q9Y383 392 aaKnown RBP5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 AK5Q9Y6K8 562 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 COMMD3-BMI1R4GMX3 469 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 KIF24Q5T7B8 1368 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 TOP2BQ02880 1626 aa5.26□□□□□ -1.57
HMGB1P19-201ENST00000517578 ITSN2Q9NZM3 1697 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 NPATQ14207 1427 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 PDS5BQ9NTI5 1447 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 BTBD19C9JJ37 291 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 SPECC1L-ADORA2AF8WAN1 911 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 SLC27A2O14975 620 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 HSF2BPO75031 334 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 CLASP2O75122 1294 aaKnown RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 HIP1RO75146 1068 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 TACC1O75410 805 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 PAGE1O75459 146 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 SYF2O95926 243 aaKnown RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 LMNAP02545 664 aaKnown RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 CEACAM5P06731 702 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 CELA3AP09093 270 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 CLTAP09496 248 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 LINGO3P0C6S8 592 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 LACTBP83111 547 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 KLC1Q07866 573 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 NSUN2Q08J23 767 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 ZNF268Q14587 947 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 ADRM1Q16186 407 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 GLE1Q53GS7 698 aaKnown RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 TTC22Q5TAA0 569 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 C6orf89Q6UWU4 347 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 CLEC4GQ6UXB4 293 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 MPRIPQ6WCQ1 1025 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 CDC37L1Q7L3B6 337 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 UBE3BQ7Z3V4 1068 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 ERICH1Q86X53 443 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 CACNA2D3Q8IZS8 1091 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 MYO1HQ8N1T3 1032 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 RNF10Q8N5U6 811 aaKnown RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 SYT2Q8N9I0 419 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 LRRN4CLQ8ND94 238 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 CCDC110Q8TBZ0 833 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 NEK9Q8TD19 979 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 ACMSDQ8TDX5 336 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 HVCN1Q96D96 273 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 NDNQ99608 321 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 RTFDC1Q9BY42 306 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 RC3H2Q9HBD1 1191 aaKnown RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 DDX21Q9NR30 783 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 SLC5A4Q9NY91 659 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 IL1RAPL1Q9NZN1 696 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 TBC1D7Q9P0N9 293 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 BAIAP2L1Q9UHR4 511 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 PUF60Q9UHX1 559 aaKnown RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 FBXO9Q9UK97 447 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 DSEQ9UL01 958 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 PPM1HQ9ULR3 514 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 TTC7AQ9ULT0 858 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 HPCAL4Q9UM19 191 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 CNPY2Q9Y2B0 182 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 C2CD2Q9Y426 696 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 SAMM50Q9Y512 469 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 MSH6P52701 1360 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 ERCC6Q03468 1493 aa5.25□□□□□ -1.57
HMGB1P19-201ENST00000517578 FAM135BQ49AJ0 1406 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 YTHDC2Q9H6S0 1430 aaKnown RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 ENC1O14682 589 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 FIBPO43427 364 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 SMARCA5O60264 1052 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 RNGTTO60942 597 aaKnown RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 HNRNPCP07910 306 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 ZFYP08048 801 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 TSPY4P0CV99 314 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 TSPY10P0CW01 314 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 ATP2A2P16615 1042 aaKnown RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 KRT4P19013 534 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 CCNCP24863 283 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 S100A5P33763 92 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 HOXD12P35452 270 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 MAGEA10P43363 369 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 SCNN1BP51168 640 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 ZNF132P52740 706 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 POLE2P56282 527 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 ITIH3Q06033 890 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 PDE4BQ07343 736 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 BTG3Q14201 252 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 NONOQ15233 471 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 TAF11Q15544 211 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 ZNF124Q15973 351 aa5.24□□□□□ -1.57
HMGB1P19-201ENST00000517578 ALDH1L2Q3SY69 923 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms