RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 GNAT1P11488 350 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 GLRA2P23416 452 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 AFMP43652 599 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 ZNF131P52739 623 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 POLGP54098 1239 aaPredicted RBP10.98□□□□□ -0.65
CLN8-202ENST00000517514 RBL2Q08999 1139 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 RAD51AP2Q09MP3 1159 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 MBTPS1Q14703 1052 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 PRPF31Q8WWY3 499 aaKnown RBP10.98□□□□□ -0.65
CLN8-202ENST00000517514 DDX12PQ92771 950 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 TRIM43Q96BQ3 446 aaPredicted RBP10.98□□□□□ -0.65
CLN8-202ENST00000517514 ZNF668Q96K58 619 aaPredicted RBP10.98□□□□□ -0.65
CLN8-202ENST00000517514 TIGD1Q96MW7 591 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 FIZ1Q96SL8 496 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 FGFBP2Q9BYJ0 223 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 TRIM9Q9C026 710 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 FAM49AQ9H0Q0 323 aaPredicted RBP10.98□□□□□ -0.65
CLN8-202ENST00000517514 BLZF1Q9H2G9 400 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 ADAMTS10Q9H324 1103 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 SUGCTQ9HAC7 445 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 ATP6V0A4Q9HBG4 840 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 SUCLA2Q9P2R7 463 aaPredicted RBP10.98□□□□□ -0.65
CLN8-202ENST00000517514 USP25Q9UHP3 1055 aa10.98□□□□□ -0.65
CLN8-202ENST00000517514 CHRNA1P02708 482 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 CKBP12277 381 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 EHHADHQ08426 723 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 TMEM62Q0P6H9 643 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 DPYDQ12882 1025 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 CAPSQ13938 189 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 NFKBIBQ15653 356 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 FAM26DQ5JW98 314 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 ZNF618Q5T7W0 954 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 IER5Q5VY09 327 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 DYMQ7RTS9 669 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 METTL13Q8N6R0 699 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 MCPH1Q8NEM0 835 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 SLC7A3Q8WY07 619 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 ERCC4Q92889 916 aaPredicted RBP10.97□□□□□ -0.65
CLN8-202ENST00000517514 PPP1R16BQ96T49 567 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 NOC4LQ9BVI4 516 aaKnown RBP10.97□□□□□ -0.65
CLN8-202ENST00000517514 POLR3FQ9H1D9 316 aaPredicted RBP10.97□□□□□ -0.65
CLN8-202ENST00000517514 WNT8AQ9H1J5 351 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 MAGEF1Q9HAY2 307 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 MROH7Q68CQ1 1323 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 ADGRA3Q8IWK6 1321 aa10.97□□□□□ -0.65
CLN8-202ENST00000517514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
CLN8-202ENST00000517514 DCDC2CA8MYV0 355 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 KIAA0355O15063 1070 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.65
CLN8-202ENST00000517514 GAS2O43903 313 aaKnown RBP10.96□□□□□ -0.65
CLN8-202ENST00000517514 CLTBP09497 229 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 IQCF3P0C7M6 154 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 GPC3P51654 580 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 LAMTOR4Q0VGL1 99 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 PNOCQ13519 176 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 FAM102BQ5T8I3 360 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 TAF2Q6P1X5 1199 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 ELOA2Q8IYF1 753 aaPredicted RBP10.96□□□□□ -0.65
CLN8-202ENST00000517514 CEP57L1Q8IYX8 460 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 RETREG2Q8NC44 543 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 CNNM3Q8NE01 707 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 SPATA20Q8TB22 786 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 TMEM40Q8WWA1 233 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 HPS3Q969F9 1004 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 PYM1Q9BRP8 204 aaKnown RBP10.96□□□□□ -0.65
CLN8-202ENST00000517514 IFT122Q9HBG6 1241 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 KCND2Q9NZV8 630 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 COL4A3BPQ9Y5P4 624 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 CDY2AQ9Y6F7 541 aa10.96□□□□□ -0.65
CLN8-202ENST00000517514 GOLGA6L22H0YM25 854 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 TLR3O15455 904 aaKnown RBP10.95□□□□□ -0.66
CLN8-202ENST00000517514 EDN1P05305 212 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 CYP2C18P33260 490 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 THPOP40225 353 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 SARSP49591 514 aaKnown RBP10.95□□□□□ -0.66
CLN8-202ENST00000517514 RGS19P49795 217 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 NLRP11P59045 1033 aaKnown RBP10.95□□□□□ -0.66
CLN8-202ENST00000517514 MRPS6P82932 125 aaKnown RBP10.95□□□□□ -0.66
CLN8-202ENST00000517514 COASYQ13057 564 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 POSTNQ15063 836 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 KIZQ2M2Z5 673 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 TCTN1Q2MV58 587 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 TAS1R3Q7RTX0 852 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 RHPN2Q8IUC4 686 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 EXOC8Q8IYI6 725 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 NME8Q8N427 588 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 GLIS3Q8NEA6 775 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 TCP11Q8WWU5 503 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 PSPC1Q8WXF1 523 aaKnown RBP10.95□□□□□ -0.66
CLN8-202ENST00000517514 CCDC43Q96MW1 224 aaKnown RBP10.95□□□□□ -0.66
CLN8-202ENST00000517514 JPH2Q9BR39 696 aaPredicted RBP10.95□□□□□ -0.66
CLN8-202ENST00000517514 KIFC3Q9BVG8 833 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 TIPINQ9BVW5 301 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 STRA6Q9BX79 667 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 CLSTN2Q9H4D0 955 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 MINDY3Q9H8M7 445 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 ODF2LQ9ULJ1 636 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 AKT3Q9Y243 479 aa10.95□□□□□ -0.66
CLN8-202ENST00000517514 PTPRSQ13332 1948 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms