RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 ASTN1O14525 1302 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 MAPK13O15264 365 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 HIP1RO75146 1068 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 PRPF6O94906 941 aaKnown RBP11.22□□□□□ -0.61
SNF8-214ENST00000515174 MYBP10242 640 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 CYP2C8P10632 490 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 ERCC3P19447 782 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 NR2F2P24468 414 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 GCLCP48506 637 aaPredicted RBP11.22□□□□□ -0.61
SNF8-214ENST00000515174 ACTR2P61160 394 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 CNTN2Q02246 1040 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 ENPEPQ07075 957 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 RAD51AP2Q09MP3 1159 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 SLC9C1Q4G0N8 1177 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 CCDC40Q4G0X9 1142 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 XKR3Q5GH77 459 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 ODR4Q5SWX8 454 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 HS2ST1Q7LGA3 356 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 ANKRD23Q86SG2 305 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 NCAPG2Q86XI2 1143 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 CREBRFQ8IUR6 639 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 NELFCDQ8IXH7 590 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 CCDC170Q8IYT3 715 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 ABRAQ8N0Z2 381 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 SYN2Q92777 582 aaPredicted RBP11.22□□□□□ -0.61
SNF8-214ENST00000515174 KIFAP3Q92845 792 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 ARMC5Q96C12 935 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 BORCS6Q96GS4 357 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 ADGRA2Q96PE1 1338 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 PTPN18Q99952 460 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 GBP3Q9H0R5 595 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 TXNRD2Q9NNW7 524 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 ARMCX3Q9UH62 379 aaPredicted RBP11.22□□□□□ -0.61
SNF8-214ENST00000515174 PLAGL2Q9UPG8 496 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 PPP2R2CQ9Y2T4 447 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 DAAM1Q9Y4D1 1078 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNF8-214ENST00000515174 ADGRG1Q9Y653 693 aa11.22□□□□□ -0.61
SNF8-214ENST00000515174 IGSF9BQ9UPX0 1349 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 USP27XA6NNY8 438 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 SFI1A8K8P3 1242 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 RNF225M0QZC1 329 aaPredicted RBP11.21□□□□□ -0.61
SNF8-214ENST00000515174 STRNO43815 780 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 ZNF862O60290 1169 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 DGAT1O75907 488 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 NR3C1P04150 777 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 CCDC175P0C221 793 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 SUPT20HL2P0C7V6 817 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 EPB41P11171 864 aaKnown RBP11.21□□□□□ -0.61
SNF8-214ENST00000515174 TRIM21P19474 475 aaKnown RBP11.21□□□□□ -0.61
SNF8-214ENST00000515174 GTF2F1P35269 517 aaKnown RBP eCLIP11.21□□□□□ -0.61
SNF8-214ENST00000515174 PSMC2P35998 433 aaKnown RBP11.21□□□□□ -0.61
SNF8-214ENST00000515174 NCKAP1LP55160 1127 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 ETF1P62495 437 aaKnown RBP11.21□□□□□ -0.61
SNF8-214ENST00000515174 CCNA1P78396 465 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 KCNMA1Q12791 1236 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 UGCGQ16739 394 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 PTPN21Q16825 1174 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 Q3C1V9 767 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 ANO5Q75V66 913 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 MCPH1Q8NEM0 835 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 MYRIPQ8NFW9 859 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 KIF18AQ8NI77 898 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 AFAP1L1Q8TED9 768 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 CPLX3Q8WVH0 158 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 NIFKQ9BYG3 293 aaKnown RBP11.21□□□□□ -0.61
SNF8-214ENST00000515174 PLCB1Q9NQ66 1216 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 ZNHIT6Q9NWK9 470 aaKnown RBP11.21□□□□□ -0.61
SNF8-214ENST00000515174 PKD2L1Q9P0L9 805 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 MORF4L1Q9UBU8 362 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 FBXL5Q9UKA1 691 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 MYO6Q9UM54 1294 aa11.21□□□□□ -0.61
SNF8-214ENST00000515174 EPN1Q9Y6I3 576 aaPredicted RBP11.21□□□□□ -0.61
SNF8-214ENST00000515174 SYNGAP1Q96PV0 1343 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 H0YCG3 227 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 H0YGN5 161 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 PMM2O15305 246 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 NMT1P30419 496 aaKnown RBP11.2□□□□□ -0.62
SNF8-214ENST00000515174 SMTNP53814 917 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 ERVK-9P63128 1117 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 ERVK-24P63145 666 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 SP2Q02086 613 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 GOLGA8FQ08AF8 430 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 GOLGA8DPQ0D2H9 430 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 KCTD2Q14681 263 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 PPP2R5AQ15172 486 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 XKR9Q5GH70 373 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 SWSAP1Q6NVH7 229 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 TRIM65Q6PJ69 517 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 WDR59Q6PJI9 974 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 RAD9BQ6WBX8 426 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 ZNF467Q7Z7K2 595 aaPredicted RBP11.2□□□□□ -0.62
SNF8-214ENST00000515174 SMCR8Q8TEV9 937 aaPredicted RBP11.2□□□□□ -0.62
SNF8-214ENST00000515174 FGD4Q96M96 766 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 ACCSQ96QU6 501 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 PARK7Q99497 189 aaKnown RBP11.2□□□□□ -0.62
SNF8-214ENST00000515174 ZCCHC17Q9NP64 241 aaKnown RBP11.2□□□□□ -0.62
SNF8-214ENST00000515174 TRMT1Q9NXH9 659 aaKnown RBP11.2□□□□□ -0.62
SNF8-214ENST00000515174 GABBR1Q9UBS5 961 aa11.2□□□□□ -0.62
SNF8-214ENST00000515174 R3HCC1Q9Y3T6 440 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms