RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 JDP2Q8WYK2 163 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 NUDT11Q96G61 164 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 FAXDC2Q96IV6 333 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 QRSL1Q9H0R6 528 aaKnown RBP6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 KCTD10Q9H3F6 313 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 NUMBLQ9Y6R0 609 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 A0A0A6YYJ9 748 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 ST20-MTHFSA0A0A6YYL1 179 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 SH3D21A4FU49 640 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 H0Y858 1186 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 RFXAPO00287 272 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 HMGB1P09429 215 aaKnown RBP6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 NFATC3Q12968 1075 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 ZNF385BQ569K4 471 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 TOR2AQ5JU69 321 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 TMEM200BQ69YZ2 307 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 GRAMD4Q6IC98 578 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 TP53I13Q8NBR0 393 aaPredicted RBP6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 WDR48Q8TAF3 677 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 RPGRQ92834 1020 aaKnown RBP6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 CHMP4CQ96CF2 233 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 HOOK2Q96ED9 719 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 SPATA25Q9BR10 227 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 HAPLN2Q9GZV7 340 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 WNT8AQ9H1J5 351 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 KCMF1Q9P0J7 381 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 FTSJ1Q9UET6 329 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 KCNG1Q9UIX4 513 aa6.94□□□□□ -1.3
HMGCS1-207ENST00000514610 CYP7B1O75881 506 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 RAP1GAPP47736 663 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 MTNR1BP49286 362 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 AFF3P51826 1226 aaKnown RBP6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 ODF1Q14990 250 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 VMACQ2NL98 169 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 RGL3Q3MIN7 710 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 ZBTB46Q86UZ6 589 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 YTHDC1Q96MU7 727 aaKnown RBP6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 SLC13A1Q9BZW2 595 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 METTL14Q9HCE5 456 aaKnown RBP6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 DNAJC28Q9NX36 388 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 MKS1Q9NXB0 559 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 NTMQ9P121 344 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 PRSS50Q9UI38 385 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 CDC42EP3Q9UKI2 254 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 SPEF1Q9Y4P9 236 aa6.93□□□□□ -1.3
HMGCS1-207ENST00000514610 A0A0A6YYK5 440 aaPredicted RBP6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 RAB27AP51159 221 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 LGALS4P56470 323 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 PPARAQ07869 468 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 TOP3AQ13472 1001 aaPredicted RBP6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 TTLL7Q6ZT98 887 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 BMP8AQ7Z5Y6 402 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 TSPEARQ8WU66 669 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 SOX7Q9BT81 388 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 L2HGDHQ9H9P8 463 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 DPP7Q9UHL4 492 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 USP18Q9UMW8 372 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 PCDHB6Q9Y5E3 794 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 EID1Q9Y6B2 187 aa6.92□□□□□ -1.3
HMGCS1-207ENST00000514610 ARID1BQ8NFD5 2236 aaPredicted RBP6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 A0A0G2JNJ9 132 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 AKAP10O43572 662 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 CFBP00751 764 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 OSMP13725 252 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 AGXTP21549 392 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 POLD1P28340 1107 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 SARSP49591 514 aaKnown RBP6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 KCNQ1P51787 676 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 EPHB1P54762 984 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 MRPS9P82933 396 aaKnown RBP6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 EIF4HQ15056 248 aaKnown RBP6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 DGKDQ16760 1214 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 GAREM2Q75VX8 874 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 OTOP2Q7RTS6 562 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 CARFQ8N187 725 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 FDXACB1Q9BRP7 624 aaPredicted RBP6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 NOL10Q9BSC4 688 aaKnown RBP6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 RTFDC1Q9BY42 306 aaPredicted RBP6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 ZNF277Q9NRM2 450 aaPredicted RBP6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 AASDHPPTQ9NRN7 309 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 Q9UFV3 132 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 EVLQ9UI08 416 aaPredicted RBP6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 FBXO10Q9UK96 956 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 GPR45Q9Y5Y3 372 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 CDY2AQ9Y6F7 541 aa6.91□□□□□ -1.3
HMGCS1-207ENST00000514610 CUTAO60888 179 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 C8AP07357 584 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 ETV4P43268 484 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 STAT5BP51692 787 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 KRT85P78386 507 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 MAP3K12Q12852 859 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 LRRC41Q15345 812 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 CLUL1Q15846 466 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 MUM1Q2TAK8 710 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 MCTP2Q6DN12 878 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 LARP4Q71RC2 724 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 AMOTL1Q8IY63 956 aa6.9□□□□□ -1.3
HMGCS1-207ENST00000514610 CDYL2Q8N8U2 506 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms