RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 DGKIO75912 1065 aa21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 EIF4BP23588 611 aaKnown RBP21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 CTNNB1P35222 781 aa21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 SARSP49591 514 aaKnown RBP21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 BTG3Q14201 252 aaPredicted RBP21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 TTC38Q5R3I4 469 aa21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 RHPN2Q8IUC4 686 aa21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 KSR1Q8IVT5 923 aa21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 TMEM192Q8IY95 271 aa21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 CRIPAKQ8N1N5 446 aa21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 ZNF689Q96CS4 500 aaPredicted RBP21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 ZSWIM4Q9H7M6 989 aa21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 SUCLA2Q9P2R7 463 aaPredicted RBP21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 LRFN2Q9ULH4 789 aa21.16■□□□□ 0.98
LPCAT1-206ENST00000514484 A0A087WZ62 844 aa21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 SLITRK3O94933 977 aa21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 LINC00271P0C7V0 271 aa21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 DARSP14868 501 aaKnown RBP21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 POU3F3P20264 500 aaPredicted RBP21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 DNM2P50570 870 aa21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 POLGP54098 1239 aaPredicted RBP21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 SKIV2LQ15477 1246 aaKnown RBP21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 XKR9Q5GH70 373 aa21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 ODR4Q5SWX8 454 aa21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 NLRP4Q96MN2 994 aa21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 FDXACB1Q9BRP7 624 aaPredicted RBP21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 RGS18Q9NS28 235 aa21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 XIRP2A4UGR9 3374 aa21.15■□□□□ 0.98
LPCAT1-206ENST00000514484 TCF20Q9UGU0 1960 aaKnown RBP21.14■□□□□ 0.98
LPCAT1-206ENST00000514484 PLXNA4Q9HCM2 1894 aa21.14■□□□□ 0.97
LPCAT1-206ENST00000514484 A0A087WWV3 80 aa21.14■□□□□ 0.97
LPCAT1-206ENST00000514484 C9IYK1 514 aa21.14■□□□□ 0.97
LPCAT1-206ENST00000514484 STAG3L1P0CL83 205 aa21.14■□□□□ 0.97
LPCAT1-206ENST00000514484 GJB2P29033 226 aa21.14■□□□□ 0.97
LPCAT1-206ENST00000514484 DSC3Q14574 896 aa21.14■□□□□ 0.97
LPCAT1-206ENST00000514484 SLC7A3Q8WY07 619 aa21.14■□□□□ 0.97
LPCAT1-206ENST00000514484 TMEM143Q96AN5 459 aa21.14■□□□□ 0.97
LPCAT1-206ENST00000514484 SAMD11Q96NU1 681 aa21.14■□□□□ 0.97
LPCAT1-206ENST00000514484 MRPL42Q9Y6G3 142 aaKnown RBP21.14■□□□□ 0.97
LPCAT1-206ENST00000514484 CSPG5O95196 566 aa21.13■□□□□ 0.97
LPCAT1-206ENST00000514484 OR52Z1P0C646 297 aa21.13■□□□□ 0.97
LPCAT1-206ENST00000514484 EMC2Q15006 297 aa21.13■□□□□ 0.97
LPCAT1-206ENST00000514484 SLC24A5Q71RS6 500 aa21.13■□□□□ 0.97
LPCAT1-206ENST00000514484 HSD17B14Q9BPX1 270 aa21.13■□□□□ 0.97
LPCAT1-206ENST00000514484 DHX33Q9H6R0 707 aaKnown RBP21.13■□□□□ 0.97
LPCAT1-206ENST00000514484 C1orf112Q9NSG2 853 aa21.13■□□□□ 0.97
LPCAT1-206ENST00000514484 THEGQ9P2T0 379 aa21.13■□□□□ 0.97
LPCAT1-206ENST00000514484 NOL7Q9UMY1 257 aaKnown RBP21.13■□□□□ 0.97
LPCAT1-206ENST00000514484 PCDHB7Q9Y5E2 793 aa21.13■□□□□ 0.97
LPCAT1-206ENST00000514484 FGFR1P11362 822 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 U2AF2P26368 475 aaKnown RBP eCLIP21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 TECP42680 631 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 MCM2P49736 904 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 TOB1P50616 345 aaPredicted RBP21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 GPM6BQ13491 265 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 MCTP1Q6DN14 999 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 OTUD6AQ7L8S5 288 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 CMTR2Q8IYT2 770 aaKnown RBP21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 NEK9Q8TD19 979 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 PIGOQ8TEQ8 1089 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 JPH2Q9BR39 696 aaPredicted RBP21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 BACH2Q9BYV9 841 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 GCOM2Q9BZD3 368 aaPredicted RBP21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 HCSTQ9UBK5 93 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 KIF3AQ9Y496 699 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 CUL9Q8IWT3 2517 aa21.12■□□□□ 0.97
LPCAT1-206ENST00000514484 RFC5P40937 340 aa21.11■□□□□ 0.97
LPCAT1-206ENST00000514484 FAM102BQ5T8I3 360 aa21.11■□□□□ 0.97
LPCAT1-206ENST00000514484 ZNF710Q8N1W2 664 aa21.11■□□□□ 0.97
LPCAT1-206ENST00000514484 CLP1Q92989 425 aaKnown RBP21.11■□□□□ 0.97
LPCAT1-206ENST00000514484 PCDHB6Q9Y5E3 794 aa21.11■□□□□ 0.97
LPCAT1-206ENST00000514484 COL4A3BPQ9Y5P4 624 aa21.11■□□□□ 0.97
LPCAT1-206ENST00000514484 TBKBP1A7MCY6 615 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 H3BNC9 293 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 DLL1O00548 723 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 MED24O75448 989 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 SPATA31C1P0DKV0 1188 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 ZSCAN20P17040 1043 aaPredicted RBP21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 BMPR1AP36894 532 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 TRAPPC10P48553 1259 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 TFF2Q03403 129 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 ORC2Q13416 577 aaPredicted RBP21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 ZNF410Q86VK4 478 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 RNF169Q8NCN4 708 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 PRPF31Q8WWY3 499 aaKnown RBP21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 PSPC1Q8WXF1 523 aaKnown RBP21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 CCDC43Q96MW1 224 aaKnown RBP21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 MTRQ99707 1265 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 XPNPEP1Q9NQW7 623 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 SMC3Q9UQE7 1217 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 PPME1Q9Y570 386 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 GTF3C3Q9Y5Q9 886 aa21.1■□□□□ 0.97
LPCAT1-206ENST00000514484 LYPLA2O95372 231 aa21.09■□□□□ 0.97
LPCAT1-206ENST00000514484 SRGAP2CP0DJJ0 459 aa21.09■□□□□ 0.97
LPCAT1-206ENST00000514484 LAMTOR4Q0VGL1 99 aa21.09■□□□□ 0.97
LPCAT1-206ENST00000514484 POTEGQ6S5H5 508 aa21.09■□□□□ 0.97
LPCAT1-206ENST00000514484 COL25A1Q9BXS0 654 aaPredicted RBP21.09■□□□□ 0.97
LPCAT1-206ENST00000514484 ATP6V0A4Q9HBG4 840 aa21.09■□□□□ 0.97
LPCAT1-206ENST00000514484 IFT122Q9HBG6 1241 aa21.09■□□□□ 0.97
LPCAT1-206ENST00000514484 TMEM161AQ9NX61 479 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms