RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 TARSL2A2RTX5 802 aaKnown RBP8.95□□□□□ -0.98
CPNE4-211ENST00000514439 TESPA1A2RU30 521 aaPredicted RBP8.95□□□□□ -0.98
CPNE4-211ENST00000514439 TMEM150BA6NC51 233 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 ATP9AO75110 1047 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 PALMO75781 387 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 CCNE2O96020 404 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 FDX1P10109 184 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 PTPRAP18433 802 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 YWHABP31946 246 aaKnown RBP8.95□□□□□ -0.98
CPNE4-211ENST00000514439 SMC1AQ14683 1233 aaKnown RBP8.95□□□□□ -0.98
CPNE4-211ENST00000514439 TERF2Q15554 542 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 CBWD6Q4V339 395 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 CBWD3Q5JTY5 395 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 CBWD5Q5RIA9 395 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 ARHGEF16Q5VV41 709 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 HDXQ7Z353 690 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 SLC9A9Q8IVB4 645 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 ZNF280CQ8ND82 737 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 SH2D3AQ9BRG2 576 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 ZNF541Q9H0D2 1346 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 PICK1Q9NRD5 415 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 SMARCAL1Q9NZC9 954 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 ZNF112Q9UJU3 913 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 PCDHGC5Q9Y5F6 944 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 LOXHD1Q8IVV2 1947 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 DOCK1Q14185 1865 aa8.95□□□□□ -0.98
CPNE4-211ENST00000514439 WDR64B1ANS9 1081 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 BACH1O14867 736 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 EXOC3O60645 756 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 FTCDO95954 541 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 PLS3P13797 630 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 OAS2P29728 719 aaKnown RBP8.94□□□□□ -0.98
CPNE4-211ENST00000514439 HMGCS2P54868 508 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 ITIH3Q06033 890 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 BAATQ14032 418 aaPredicted RBP8.94□□□□□ -0.98
CPNE4-211ENST00000514439 PPP2R5AQ15172 486 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 C10orf76Q5T2E6 689 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 UTP14CQ5TAP6 766 aaKnown RBP8.94□□□□□ -0.98
CPNE4-211ENST00000514439 ANGEL2Q5VTE6 544 aaKnown RBP8.94□□□□□ -0.98
CPNE4-211ENST00000514439 TRMT1LQ7Z2T5 733 aaKnown RBP8.94□□□□□ -0.98
CPNE4-211ENST00000514439 REPS2Q8NFH8 660 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 CCDC43Q96MW1 224 aaKnown RBP8.94□□□□□ -0.98
CPNE4-211ENST00000514439 AS3MTQ9HBK9 375 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 EHD2Q9NZN4 543 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 TCEAL9Q9UHQ7 104 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 TSKSQ9UJT2 592 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 NAGPAQ9UK23 515 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 TISP43B9A030 160 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 MAPTP10636 758 aaKnown RBP8.94□□□□□ -0.98
CPNE4-211ENST00000514439 MCM3P25205 808 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 ANXA13P27216 316 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 JAK3P52333 1124 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 PSMC5P62195 406 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 KRT76Q01546 638 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 BFSP1Q12934 665 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 ALCAMQ13740 583 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 CCDC181Q5TID7 509 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 SNRNP48Q6IEG0 339 aaKnown RBP8.94□□□□□ -0.98
CPNE4-211ENST00000514439 ALKBH5Q6P6C2 394 aaKnown RBP8.94□□□□□ -0.98
CPNE4-211ENST00000514439 DNAAF5Q86Y56 855 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 C4orf19Q8IY42 314 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 MMGT1Q8N4V1 131 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 RDH13Q8NBN7 331 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 SPATA4Q8NEY3 305 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 TRPM4Q8TD43 1214 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 TMEM206Q9H813 350 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 GPRC5CQ9NQ84 441 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 NENFQ9UMX5 172 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 MYH10P35580 1976 aa8.94□□□□□ -0.98
CPNE4-211ENST00000514439 GRID2IPA4D2P6 1211 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 BTNL10A8MVZ5 291 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 F8VZ95 297 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 H3BQF6 201 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 POLR3GO15318 223 aaPredicted RBP8.93□□□□□ -0.98
CPNE4-211ENST00000514439 EVI5O60447 810 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 ZMYND10O75800 440 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 GFPT2O94808 682 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 FERP16591 822 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 CCND2P30279 289 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 SFNP31947 248 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 STAT1P42224 750 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 MYL7Q01449 175 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 MYBPC2Q14324 1141 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 CASP8Q14790 479 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 PLA2G4FQ68DD2 849 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 HAUS6Q7Z4H7 955 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 APOBEC3FQ8IUX4 373 aaKnown RBP8.93□□□□□ -0.98
CPNE4-211ENST00000514439 C12orf42Q96LP6 360 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 ACCSQ96QU6 501 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 INTS2Q9H0H0 1204 aaKnown RBP8.93□□□□□ -0.98
CPNE4-211ENST00000514439 PCIF1Q9H4Z3 704 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 DNAJC12Q9UKB3 198 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 CD2APQ9Y5K6 639 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 MYH11P35749 1972 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 DDX3XO00571 662 aaKnown RBP eCLIP8.93□□□□□ -0.98
CPNE4-211ENST00000514439 NR3C2P08235 984 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 SOX5P35711 763 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 DNA2P51530 1060 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 NPEPPSP55786 919 aa8.93□□□□□ -0.98
CPNE4-211ENST00000514439 GTF2BQ00403 316 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms