RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 NR2E3Q9Y5X4 410 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 CDY2AQ9Y6F7 541 aa10.91□□□□□ -0.66
TOPBP1-209ENST00000513818 PDE4DIPQ5VU43 2346 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 IGKV6-21A0A0C4DH24 114 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 A0A1B0GVL5 298 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 SMIM35A0A1B0GVV1 85 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 GADD45BO75293 160 aaPredicted RBP10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 ZMYND10O75800 440 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 TIMP1P01033 207 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 CHRNA1P02708 482 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 IQCF3P0C7M6 154 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 CSF2RAP15509 400 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 SELPP16109 830 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 PFKFB1P16118 471 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 MUTP22033 750 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 RFC5P40937 340 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 STAT6P42226 847 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 MAGEA10P43363 369 aaPredicted RBP10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 SLC12A3P55017 1021 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 MGAT3Q09327 533 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 GPNMBQ14956 572 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 KIZQ2M2Z5 673 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 TCTN1Q2MV58 587 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 FAM102BQ5T8I3 360 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 RRAGBQ5VZM2 374 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 RHPN2Q8IUC4 686 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 RETREG2Q8NC44 543 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 CAGE1Q8TC20 777 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 ASAP3Q8TDY4 903 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 RAD54LQ92698 747 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 STAMQ92783 540 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 NLRP4Q96MN2 994 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 SCLT1Q96NL6 688 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 MAP7D2Q96T17 732 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 OSMRQ99650 979 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 NT5C3AQ9H0P0 336 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 POLR3FQ9H1D9 316 aaPredicted RBP10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 SUCLA2Q9P2R7 463 aaPredicted RBP10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 CCDC39Q9UFE4 941 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 TRPV2Q9Y5S1 764 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 STK24Q9Y6E0 443 aa10.9□□□□□ -0.66
TOPBP1-209ENST00000513818 CEP290O15078 2479 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 RSPH10B2B2RC85 870 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 MAGEB2O15479 319 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 POLR2DO15514 142 aaKnown RBP10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 NBNO60934 754 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 CSDE1O75534 798 aaKnown RBP10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 DGAT1O75907 488 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 GHRP10912 638 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 FGFR4P22455 802 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 CASP1P29466 404 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 GPC3P51654 580 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 RBL2Q08999 1139 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 MFSD5Q6N075 450 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 RINT1Q6NUQ1 792 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 GPBP1Q86WP2 473 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 GRAMD1CQ8IYS0 662 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 TET1Q8NFU7 2136 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 TMEM40Q8WWA1 233 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 BSNDQ8WZ55 320 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 LARP4BQ92615 738 aaKnown RBP10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 VWCEQ96DN2 955 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 LBHD1Q9BQE6 289 aaPredicted RBP10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 KIFC3Q9BVG8 833 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 FAM13BQ9NYF5 915 aa10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 LAMA2P24043 3122 aaKnown RBP10.89□□□□□ -0.67
TOPBP1-209ENST00000513818 HIP1RO75146 1068 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 XRCC6P12956 609 aaKnown RBP eCLIP10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 CYP11B2P19099 503 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 GLRA2P23416 452 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 TMOD1P28289 359 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 RANBP2P49792 3224 aaKnown RBP10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 NDUFA8P51970 172 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 NLRP11P59045 1033 aaKnown RBP10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 FPGSQ05932 587 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 CAPSQ13938 189 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 LPIN1Q14693 890 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 E2F4Q16254 413 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 ADALQ6DHV7 355 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 CCDC73Q6ZRK6 1079 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 RSPH3Q86UC2 560 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 DAW1Q8N136 415 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 SYT2Q8N9I0 419 aaPredicted RBP10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 PRPF31Q8WWY3 499 aaKnown RBP10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 PSPC1Q8WXF1 523 aaKnown RBP10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 MRPS27Q92552 414 aaKnown RBP10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 REEP2Q9BRK0 252 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 SERTAD1Q9UHV2 236 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 COL4A3BPQ9Y5P4 624 aa10.88□□□□□ -0.67
TOPBP1-209ENST00000513818 A0A087WZ62 844 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 MYMKA6NI61 221 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 SFI1A8K8P3 1242 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 M0QZ92 97 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 SLC26A4O43511 780 aa10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 GALR2O43603 387 aaPredicted RBP10.87□□□□□ -0.67
TOPBP1-209ENST00000513818 GPR32O75388 356 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms