RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 PLPPR4Q7Z2D5 763 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 ZNF720Q7Z2F6 126 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 DPP9Q86TI2 863 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 RASAL3Q86YV0 1011 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 CSGALNACT2Q8N6G5 542 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 KIAA0895Q8NCT3 520 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 AFAP1L1Q8TED9 768 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 PIGOQ8TEQ8 1089 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 SCFD2Q8WU76 684 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 IQCDQ96DY2 449 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 DRC1Q96MC2 740 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 CEP63Q96MT8 703 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 SRRTQ9BXP5 876 aaKnown RBP10.92□□□□□ -0.66
TPM3-221ENST00000513769 XPO4Q9C0E2 1151 aaKnown RBP10.92□□□□□ -0.66
TPM3-221ENST00000513769 MLXIPQ9HAP2 919 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 VTA1Q9NP79 307 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 SAMSN1Q9NSI8 373 aaKnown RBP10.92□□□□□ -0.66
TPM3-221ENST00000513769 IFNKQ9P0W0 207 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 SLC27A5Q9Y2P5 690 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 RBBP6Q7Z6E9 1792 aaKnown RBP10.92□□□□□ -0.66
TPM3-221ENST00000513769 THSD7BQ9C0I4 1608 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 UBE4BO95155 1302 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 SYNRGQ9UMZ2 1314 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 H0YCG3 227 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 NKRFO15226 690 aaKnown RBP eCLIP10.91□□□□□ -0.66
TPM3-221ENST00000513769 PPFIA4O75335 1185 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 TBCAO75347 108 aaKnown RBP10.91□□□□□ -0.66
TPM3-221ENST00000513769 DGAT1O75907 488 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 FAM13AO94988 1023 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 SUPT20HL2P0C7V6 817 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 SMTNP53814 917 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 SP2Q02086 613 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 GRB14Q14449 540 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 PLA2G2CQ5R387 149 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 CELF3Q5SZQ8 465 aaKnown RBP10.91□□□□□ -0.66
TPM3-221ENST00000513769 FAM160B1Q5W0V3 765 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 C17orf99Q6UX52 265 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 CYFIP1Q7L576 1253 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 GPR142Q7Z601 462 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 ZNF598Q86UK7 904 aaKnown RBP10.91□□□□□ -0.66
TPM3-221ENST00000513769 MYCT1Q8N699 235 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 BANK1Q8NDB2 785 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 MCPH1Q8NEM0 835 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 GOLGA5Q8TBA6 731 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 KIFAP3Q92845 792 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 THAP11Q96EK4 314 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 UIMC1Q96RL1 719 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 REEP2Q9BRK0 252 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 PORCNQ9H237 461 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 SEMA6BQ9H3T3 888 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 ABHD16BQ9H3Z7 469 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 TMEM206Q9H813 350 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 EFCC1Q9HA90 598 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 PDLIM7Q9NR12 457 aa10.91□□□□□ -0.66
TPM3-221ENST00000513769 ASTN1O14525 1302 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 SYNGAP1Q96PV0 1343 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 LOXHD1Q8IVV2 1947 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 FAM155AB1AL88 458 aaPredicted RBP10.9□□□□□ -0.66
TPM3-221ENST00000513769 DDX39AO00148 427 aaKnown RBP10.9□□□□□ -0.66
TPM3-221ENST00000513769 NRDCO43847 1150 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 CALUO43852 315 aaPredicted RBP10.9□□□□□ -0.66
TPM3-221ENST00000513769 FARP2O94887 1054 aaPredicted RBP10.9□□□□□ -0.66
TPM3-221ENST00000513769 STBD1O95210 358 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 ATP1A3P13637 1013 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 ADORA2AP29274 412 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 DNM2P50570 870 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 STAT5BP51692 787 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 MARSP56192 900 aaKnown RBP10.9□□□□□ -0.66
TPM3-221ENST00000513769 STX17P56962 302 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 PPP2R3AQ06190 1150 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 WDR78Q5VTH9 848 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 ZSCAN30Q86W11 494 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 IRF2BP1Q8IU81 584 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 SMYD4Q8IYR2 804 aaPredicted RBP10.9□□□□□ -0.66
TPM3-221ENST00000513769 SCFD1Q8WVM8 642 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 FAM167AQ96KS9 214 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 TRIM47Q96LD4 638 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 NAP1L5Q96NT1 182 aaPredicted RBP10.9□□□□□ -0.66
TPM3-221ENST00000513769 ZIC5Q96T25 663 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 DUSP9Q99956 384 aaKnown RBP10.9□□□□□ -0.66
TPM3-221ENST00000513769 NUP58Q9BVL2 599 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 STRA6Q9BX79 667 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 KCTD10Q9H3F6 313 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 MRPL44Q9H9J2 332 aaKnown RBP10.9□□□□□ -0.66
TPM3-221ENST00000513769 ZNF302Q9NR11 478 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 WRAP73Q9P2S5 460 aaPredicted RBP10.9□□□□□ -0.66
TPM3-221ENST00000513769 GABBR1Q9UBS5 961 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 CTNND2Q9UQB3 1225 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 MAPK8IP1Q9UQF2 711 aa10.9□□□□□ -0.66
TPM3-221ENST00000513769 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.9□□□□□ -0.664e-17■■□□□ 11.8
TPM3-221ENST00000513769 ZNFX1Q9P2E3 1918 aaKnown RBP10.9□□□□□ -0.67
TPM3-221ENST00000513769 CASP8AP2Q9UKL3 1982 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 A0A1W2PQC6 194 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 GSTTP1A0A1W2PQM5 241 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 KCNJ18B7U540 433 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 N4BP3O15049 544 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 ZBTB39O15060 712 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 CETN3O15182 167 aa10.89□□□□□ -0.67
TPM3-221ENST00000513769 GAS2O43903 313 aaKnown RBP10.89□□□□□ -0.67
TPM3-221ENST00000513769 COBLO75128 1261 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms