RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 ACACAQ13085 2346 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 CELSR3Q9NYQ7 3312 aa10.92□□□□□ -0.66
CLCN3-208ENST00000512813 NMT2O60551 498 aa10.91□□□□□ -0.66
CLCN3-208ENST00000512813 TDO2P48775 406 aa10.91□□□□□ -0.66
CLCN3-208ENST00000512813 CCR3P51677 355 aa10.91□□□□□ -0.66
CLCN3-208ENST00000512813 NFX1Q12986 1120 aaKnown RBP10.91□□□□□ -0.66
CLCN3-208ENST00000512813 UTP14CQ5TAP6 766 aaKnown RBP10.91□□□□□ -0.66
CLCN3-208ENST00000512813 RNF43Q68DV7 783 aa10.91□□□□□ -0.66
CLCN3-208ENST00000512813 VSIG10LQ86VR7 867 aa10.91□□□□□ -0.66
CLCN3-208ENST00000512813 FGF14Q92915 247 aa10.91□□□□□ -0.66
CLCN3-208ENST00000512813 CLUAP1Q96AJ1 413 aa10.91□□□□□ -0.66
CLCN3-208ENST00000512813 RPP25Q9BUL9 199 aaKnown RBP10.91□□□□□ -0.66
CLCN3-208ENST00000512813 CELF4Q9BZC1 486 aaKnown RBP10.91□□□□□ -0.66
CLCN3-208ENST00000512813 FAM49AQ9H0Q0 323 aaPredicted RBP10.91□□□□□ -0.66
CLCN3-208ENST00000512813 RNF19AQ9NV58 838 aa10.91□□□□□ -0.66
CLCN3-208ENST00000512813 APC2O95996 2303 aa10.91□□□□□ -0.66
CLCN3-208ENST00000512813 DOCK5Q9H7D0 1870 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 C1QL1O75973 258 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 PAPLNO95428 1278 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 MYCLP12524 364 aaPredicted RBP10.9□□□□□ -0.66
CLCN3-208ENST00000512813 CEACAM1P13688 526 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 ADCY1Q08828 1119 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 TMEM62Q0P6H9 643 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 SRSF5Q13243 272 aaKnown RBP10.9□□□□□ -0.66
CLCN3-208ENST00000512813 SH3PXD2AQ5TCZ1 1133 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 ZSCAN25Q6NSZ9 544 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 ARHGAP45Q92619 1136 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 LOXL4Q96JB6 756 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 ARRDC1-AS1Q9H2J1 176 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 RAI2Q9Y5P3 530 aa10.9□□□□□ -0.66
CLCN3-208ENST00000512813 ZFP37Q9Y6Q3 630 aaPredicted RBP10.9□□□□□ -0.66
CLCN3-208ENST00000512813 CCDC195A0A1B0GUA6 201 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 TSPY2A6NKD2 308 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 HYAL3O43820 417 aaPredicted RBP10.89□□□□□ -0.67
CLCN3-208ENST00000512813 EPN2O95208 641 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 PRB1P04280 392 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 METAP2P50579 478 aaKnown RBP eCLIP10.89□□□□□ -0.67
CLCN3-208ENST00000512813 NEDD9Q14511 834 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 PGM5Q15124 567 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 PLA2G2CQ5R387 149 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 TPRG1Q6ZUI0 275 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 CYFIP1Q7L576 1253 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 GET4Q7L5D6 327 aaPredicted RBP10.89□□□□□ -0.67
CLCN3-208ENST00000512813 DDX53Q86TM3 631 aaKnown RBP10.89□□□□□ -0.67
CLCN3-208ENST00000512813 TMEM173Q86WV6 379 aaPredicted RBP10.89□□□□□ -0.67
CLCN3-208ENST00000512813 ERC1Q8IUD2 1116 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 ABI1Q8IZP0 508 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 ST13P5Q8NFI4 369 aaPredicted RBP10.89□□□□□ -0.67
CLCN3-208ENST00000512813 IL31RAQ8NI17 732 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 MAN1C1Q9NR34 630 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 KLK13Q9UKR3 277 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 MRPS17Q9Y2R5 130 aaKnown RBP10.89□□□□□ -0.67
CLCN3-208ENST00000512813 ASXL3Q9C0F0 2248 aa10.89□□□□□ -0.67
CLCN3-208ENST00000512813 F5P12259 2224 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 SPAG17Q6Q759 2223 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 SDK1Q7Z5N4 2213 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 CHURC1-FNTBB4DL54 471 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 NT5C1B-RDH14C9J2C7 533 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 INPPL1O15357 1258 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 ARHGAP6O43182 974 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 SLC3A2P08195 630 aaKnown RBP10.88□□□□□ -0.67
CLCN3-208ENST00000512813 PDHBP11177 359 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 CSRP1P21291 193 aaKnown RBP10.88□□□□□ -0.67
CLCN3-208ENST00000512813 KLRC2P26717 231 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 FNTBP49356 437 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 ALDH7A1P49419 539 aaKnown RBP10.88□□□□□ -0.67
CLCN3-208ENST00000512813 HSD17B4P51659 736 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 GHRHRQ02643 423 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 ZNF543Q08ER8 600 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 PARM1Q6UWI2 310 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 ZNF852Q6ZMS4 543 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 LONP2Q86WA8 852 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 ZNF687Q8N1G0 1237 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 SMG7Q92540 1137 aaKnown RBP10.88□□□□□ -0.67
CLCN3-208ENST00000512813 ZNF707Q96C28 371 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-208ENST00000512813 EMILIN2Q9BXX0 1053 aa10.88□□□□□ -0.67
CLCN3-208ENST00000512813 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.88□□□□□ -0.67
CLCN3-208ENST00000512813 NOC2LQ9Y3T9 749 aaKnown RBP10.88□□□□□ -0.67
CLCN3-208ENST00000512813 CARNS1A5YM72 827 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 SHISA7A6NL88 538 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 TK2O00142 265 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 AXIN1O15169 862 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 RPS6KA5O75582 802 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 CNPP09543 421 aaKnown RBP10.87□□□□□ -0.67
CLCN3-208ENST00000512813 TOP1P11387 765 aaKnown RBP10.87□□□□□ -0.67
CLCN3-208ENST00000512813 BCAR1P56945 870 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 KRT76Q01546 638 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 CDC37Q16543 378 aaPredicted RBP10.87□□□□□ -0.67
CLCN3-208ENST00000512813 ODR4Q5SWX8 454 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 KIAA1211LQ6NV74 962 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 ELMSAN1Q6PJG2 1045 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 STOX1Q6ZVD7 989 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 MTSS1LQ765P7 747 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 CEP68Q76N32 757 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 ZBTB10Q96DT7 871 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 EDEM2Q9BV94 578 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 IL1RAPL2Q9NP60 686 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 SCUBE2Q9NQ36 999 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 ERAP1Q9NZ08 941 aa10.87□□□□□ -0.67
CLCN3-208ENST00000512813 MRPL11Q9Y3B7 192 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms