RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 RPS6KB1P23443 525 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 GATMP50440 423 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 NUBP1P53384 320 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 ERVFC1P60507 584 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 ZXDAP98168 799 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 NHLH1Q02575 133 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 KCNT2Q6UVM3 1135 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 ALYREFQ86V81 257 aaKnown RBP14.19□□□□□ -0.14
VEGFA-216ENST00000512683 LRRC43Q8N309 656 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 BRF1Q92994 677 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 LENG9Q96B70 501 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 ZNF558Q96NG5 402 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 CASD1Q96PB1 797 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 INO80BQ9C086 356 aaPredicted RBP14.19□□□□□ -0.14
VEGFA-216ENST00000512683 SPG21Q9NZD8 308 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 AKT3Q9Y243 479 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 CYP3A7-CYP3A51PA0A087WV96 503 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 TMEM221A6NGB7 291 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 M0R296 226 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 ADAMTS3O15072 1205 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 VTNP04004 478 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 OATP04181 439 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 DARSP14868 501 aaKnown RBP14.18□□□□□ -0.14
VEGFA-216ENST00000512683 CYP3A7P24462 503 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 DNM2P50570 870 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 NTRK3Q16288 839 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 Q4G0T1 1027 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 GALNT17Q6IS24 598 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 ECHDC2Q86YB7 292 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 EXOC8Q8IYI6 725 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 SLC5A5Q92911 643 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 PBXIP1Q96AQ6 731 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 JPH2Q9BR39 696 aaPredicted RBP14.18□□□□□ -0.14
VEGFA-216ENST00000512683 MRPL9Q9BYD2 267 aaKnown RBP14.18□□□□□ -0.14
VEGFA-216ENST00000512683 NIFKQ9BYG3 293 aaKnown RBP14.18□□□□□ -0.14
VEGFA-216ENST00000512683 S1PR5Q9H228 398 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 STK39Q9UEW8 545 aa14.18□□□□□ -0.14
VEGFA-216ENST00000512683 BARX2Q9UMQ3 279 aaPredicted RBP14.18□□□□□ -0.14
VEGFA-216ENST00000512683 RALGAPA2Q2PPJ7 1873 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 PER2O15055 1255 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 MSH4O15457 936 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 ZNF862O60290 1169 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 GAS7O60861 476 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 NEFLP07196 543 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 FGFR1P11362 822 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 GPC3P51654 580 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 ITIH3Q06033 890 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 SIGLEC14Q08ET2 396 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 TBC1D8BQ0IIM8 1120 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 GIT2Q14161 759 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 TARBP2Q15633 366 aaKnown RBP14.17□□□□□ -0.14
VEGFA-216ENST00000512683 TPRNQ4KMQ1 711 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 XKR3Q5GH77 459 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 ANKRD54Q6NXT1 300 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 MOXD1Q6UVY6 613 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 TRIM22Q8IYM9 498 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 MRPL43Q8N983 215 aaKnown RBP14.17□□□□□ -0.14
VEGFA-216ENST00000512683 CASP10Q92851 521 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 NECTIN4Q96NY8 510 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 TCF25Q9BQ70 676 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 TEKT3Q9BXF9 490 aa14.17□□□□□ -0.14
VEGFA-216ENST00000512683 GCOM2Q9BZD3 368 aaPredicted RBP14.17□□□□□ -0.14
VEGFA-216ENST00000512683 MYH9P35579 1960 aaKnown RBP14.16□□□□□ -0.14
VEGFA-216ENST00000512683 ALDH7A1P49419 539 aaKnown RBP14.16□□□□□ -0.14
VEGFA-216ENST00000512683 MRE11P49959 708 aa14.16□□□□□ -0.14
VEGFA-216ENST00000512683 CLCN3P51790 818 aa14.16□□□□□ -0.14
VEGFA-216ENST00000512683 PTPN5P54829 565 aa14.16□□□□□ -0.14
VEGFA-216ENST00000512683 LRRC55Q6ZSA7 311 aa14.16□□□□□ -0.14
VEGFA-216ENST00000512683 TMC7Q7Z402 723 aa14.16□□□□□ -0.14
VEGFA-216ENST00000512683 ZNF598Q86UK7 904 aaKnown RBP14.16□□□□□ -0.14
VEGFA-216ENST00000512683 ZNF410Q86VK4 478 aa14.16□□□□□ -0.14
VEGFA-216ENST00000512683 SUGP1Q8IWZ8 645 aaKnown RBP14.16□□□□□ -0.14
VEGFA-216ENST00000512683 ZSWIM6Q9HCJ5 1215 aa14.16□□□□□ -0.14
VEGFA-216ENST00000512683 ENTPD7Q9NQZ7 604 aa14.16□□□□□ -0.14
VEGFA-216ENST00000512683 NR2E1Q9Y466 385 aa14.16□□□□□ -0.14
VEGFA-216ENST00000512683 PPME1Q9Y570 386 aa14.16□□□□□ -0.14
VEGFA-216ENST00000512683 IGKV6-21A0A0C4DH24 114 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 DKC1O60832 514 aaKnown RBP eCLIP14.15□□□□□ -0.14
VEGFA-216ENST00000512683 ZNF623O75123 536 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 PSMD10O75832 226 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 CSPG5O95196 566 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 IBSPP21815 317 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-216ENST00000512683 PDIA3P30101 505 aaKnown RBP14.15□□□□□ -0.14
VEGFA-216ENST00000512683 TECP42680 631 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 POLGP54098 1239 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-216ENST00000512683 NLRP5P59047 1200 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 PRKCEQ02156 737 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 TOB2Q14106 344 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-216ENST00000512683 SMC1AQ14683 1233 aaKnown RBP14.15□□□□□ -0.14
VEGFA-216ENST00000512683 LRCH2Q5VUJ6 765 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 CES5AQ6NT32 575 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 CPLX2Q6PUV4 134 aaKnown RBP14.15□□□□□ -0.14
VEGFA-216ENST00000512683 B3GNT9Q6UX72 402 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 RUFY3Q7L099 469 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 SLC39A11Q8N1S5 342 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 FBXL6Q8N531 539 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 PHKBQ93100 1093 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 RPGRIP1Q96KN7 1286 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 SLC26A6Q9BXS9 759 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 RNF19AQ9NV58 838 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms