RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 PTCH2Q9Y6C5 1203 aa11.04□□□□□ -0.64
PDGFRA-209ENST00000512143 SCN10AQ9Y5Y9 1956 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 SMTNL1A8MU46 457 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 PSMA7O14818 248 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 EIF3DO15371 548 aaKnown RBP eCLIP11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 GAS2O43903 313 aaKnown RBP11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 C22orf31O95567 290 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 MYBP10242 640 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 RARBP10826 455 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 ZNF18P17022 549 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 NMT1P30419 496 aaKnown RBP11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 HOXC8P31273 242 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 POLGP54098 1239 aaPredicted RBP11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 NCKAP1LP55160 1127 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 SOX10P56693 466 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 PURAQ00577 322 aaKnown RBP11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 BEX3Q00994 111 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 STIM1Q13586 685 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 ZCWPW2Q504Y3 356 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 BRDTQ58F21 947 aaPredicted RBP11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 ODR4Q5SWX8 454 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 MARCH8Q5T0T0 291 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 LHX8Q68G74 356 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 KLHL10Q6JEL2 608 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 MAEAQ7L5Y9 396 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 FAM178BQ8IXR5 827 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 MYOCDQ8IZQ8 938 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 SLC7A3Q8WY07 619 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 BSNDQ8WZ55 320 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 P2RX5Q93086 422 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 KCTD10Q9H3F6 313 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 ZHX3Q9H4I2 956 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 MRPL44Q9H9J2 332 aaKnown RBP11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 DDX20Q9UHI6 824 aaKnown RBP11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 CTNND2Q9UQB3 1225 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 TRPC6Q9Y210 931 aa11.03□□□□□ -0.64
PDGFRA-209ENST00000512143 KAT6AQ92794 2004 aa11.02□□□□□ -0.64
PDGFRA-209ENST00000512143 BECN2A8MW95 431 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 MAGEB2O15479 319 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 AP5Z1O43299 807 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 PGK1P00558 417 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 GLRA2P23416 452 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 CNGA1P29973 690 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 NPTX2P47972 431 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 PSEN2P49810 448 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 STX17P56962 302 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 ADAM17P78536 824 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 GTF2BQ00403 316 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 TBC1D8BQ0IIM8 1120 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 DRP2Q13474 957 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 MFSD10Q14728 455 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 KNOP1Q1ED39 458 aaKnown RBP11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 CDKAL1Q5VV42 579 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 IER5Q5VY09 327 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 ANKRD40Q6AI12 368 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 SLC17A8Q8NDX2 589 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 TMEM161BQ8NDZ6 487 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 ASAP3Q8TDY4 903 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 TRAPPC12Q8WVT3 735 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 TMEM143Q96AN5 459 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 JPH2Q9BR39 696 aaPredicted RBP11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 POLR3FQ9H1D9 316 aaPredicted RBP11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 XPNPEP3Q9NQH7 507 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 FANCLQ9NW38 375 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 ARHGAP28Q9P2N2 729 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 KCNG1Q9UIX4 513 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 NFE2L3Q9Y4A8 694 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 EVPLQ92817 2033 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 UBE4BO95155 1302 aa11.02□□□□□ -0.65
PDGFRA-209ENST00000512143 BICDL2A1A5D9 508 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 MBLAC1A4D2B0 266 aaPredicted RBP11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 TRIM49BA6NDI0 452 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 RRN3P2A6NIE6 340 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 TGFB1I1O43294 461 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 MSCO60682 206 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 PRPF6O94906 941 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 KIF20AO95235 890 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 MYL3P08590 195 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 C6orf222P0C671 652 aaPredicted RBP11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 HSPA8P11142 646 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 KLRC1P26715 233 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 PEX3P56589 373 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 LRRC63Q05C16 580 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 KCNA1Q09470 495 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 PPFIA1Q13136 1202 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 ALCAMQ13740 583 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 HIC1Q14526 733 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 GRIK4Q16099 956 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 KIAA0753Q2KHM9 967 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 ZC2HC1CQ53FD0 456 aaPredicted RBP11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 GNASQ5JWF2 1037 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 L1TD1Q5T7N2 865 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 SARM1Q6SZW1 724 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 MTHFD1LQ6UB35 978 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 IRF2BP1Q8IU81 584 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 ZC3H3Q8IXZ2 948 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 TMEM174Q8WUU8 243 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 PRPF31Q8WWY3 499 aaKnown RBP11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 MTG1Q9BT17 334 aaPredicted RBP11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 KATNAL1Q9BW62 490 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms