RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 OTUD6AQ7L8S5 288 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 NEK9Q8TD19 979 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 GDPD5Q8WTR4 605 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 PPM1EQ8WY54 764 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 JPH2Q9BR39 696 aaPredicted RBP12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 KIF3AQ9Y496 699 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 ADGRA3Q8IWK6 1321 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 OR52Z1P0C646 297 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 SPATA31C1P0DKV0 1188 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 FAM189BP81408 668 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 CCDC85BQ15834 202 aaPredicted RBP12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 EPC2Q52LR7 807 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 XKR9Q5GH70 373 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 SLC24A5Q71RS6 500 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 TMEM192Q8IY95 271 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 FIBCD1Q8N539 461 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 NLRP7Q8WX94 980 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 SAMD11Q96NU1 681 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 PRDM6Q9NQX0 595 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 C1orf112Q9NSG2 853 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 NOL7Q9UMY1 257 aaKnown RBP12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 GTF3C3Q9Y5Q9 886 aa12.99□□□□□ -0.33
SH3RF1-205ENST00000511421 A0A087WZ62 844 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 DENND3A2RUS2 1198 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 CSDE1O75534 798 aaKnown RBP12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 STAG3L1P0CL83 205 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 FGFR4P22455 802 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 RFC5P40937 340 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 TECP42680 631 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 ZNF410Q86VK4 478 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 RHPN2Q8IUC4 686 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 KSR1Q8IVT5 923 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 EXOC8Q8IYI6 725 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 FBXO22Q8NEZ5 403 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 SLC7A3Q8WY07 619 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 CLP1Q92989 425 aaKnown RBP12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 SCLT1Q96NL6 688 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 FDXACB1Q9BRP7 624 aaPredicted RBP12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 ANKEF1Q9NU02 776 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 LMCD1Q9NZU5 365 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 PCDHB6Q9Y5E3 794 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 UNC80Q8N2C7 3258 aa12.98□□□□□ -0.33
SH3RF1-205ENST00000511421 GATMP50440 423 aa12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 POLGP54098 1239 aaPredicted RBP12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 CUL4AQ13619 759 aa12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 BTG3Q14201 252 aaPredicted RBP12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 EMC2Q15006 297 aa12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 CATSPER3Q86XQ3 398 aa12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 CMTR2Q8IYT2 770 aaKnown RBP12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 PRPF31Q8WWY3 499 aaKnown RBP12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 TMEM143Q96AN5 459 aa12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 IFT122Q9HBG6 1241 aa12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 XPNPEP1Q9NQW7 623 aa12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 SMC3Q9UQE7 1217 aa12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 PCDHB7Q9Y5E2 793 aa12.97□□□□□ -0.33
SH3RF1-205ENST00000511421 A0A087WWV3 80 aa12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 C5orf67F2Z3F1 127 aa12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 H3BNC9 293 aa12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 GAS2O43903 313 aaKnown RBP12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 MED24O75448 989 aa12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 XRCC6P12956 609 aaKnown RBP eCLIP12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 BMPR1AP36894 532 aa12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 PIGOQ8TEQ8 1089 aa12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 PSPC1Q8WXF1 523 aaKnown RBP12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 POLR3CQ9BUI4 534 aaPredicted RBP12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 ELAC1Q9H777 363 aaKnown RBP12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 TUFT1Q9NNX1 390 aa12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 LRFN2Q9ULH4 789 aa12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 COL4A3BPQ9Y5P4 624 aa12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 MRPL42Q9Y6G3 142 aaKnown RBP12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 SPTBN5Q9NRC6 3674 aaKnown RBP12.96□□□□□ -0.33
SH3RF1-205ENST00000511421 ZSCAN20P17040 1043 aaPredicted RBP12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 IBSPP21815 317 aaPredicted RBP12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 RARRES1P49788 294 aa12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 LAMTOR4Q0VGL1 99 aa12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 PTGDRQ13258 359 aa12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 GPM6BQ13491 265 aa12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 PAN2Q504Q3 1202 aaKnown RBP12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 FAM102BQ5T8I3 360 aa12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 MCTP1Q6DN14 999 aa12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 TCP11Q8WWU5 503 aa12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 NLRP4Q96MN2 994 aa12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 MTRQ99707 1265 aa12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 RNF19AQ9NV58 838 aa12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 TMEM161AQ9NX61 479 aa12.96□□□□□ -0.34
SH3RF1-205ENST00000511421 COL4A4P53420 1690 aaPredicted RBP12.95□□□□□ -0.34
SH3RF1-205ENST00000511421 H3BQV1 296 aa12.95□□□□□ -0.34
SH3RF1-205ENST00000511421 DGAT1O75907 488 aa12.95□□□□□ -0.34
SH3RF1-205ENST00000511421 RB1P06400 928 aa12.95□□□□□ -0.34
SH3RF1-205ENST00000511421 RPA1P27694 616 aa12.95□□□□□ -0.34
SH3RF1-205ENST00000511421 CTNNB1P35222 781 aa12.95□□□□□ -0.34
SH3RF1-205ENST00000511421 FERMT3Q86UX7 667 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms