RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	MAP7D2	Q96T17	732 aa		13.63	□□□□□ -0.23
CLDND1-223	ENST00000511081	PLVAP	Q9BX97	442 aa		13.63	□□□□□ -0.23
CLDND1-223	ENST00000511081	ELAC1	Q9H777	363 aa	Known RBP	13.63	□□□□□ -0.23
CLDND1-223	ENST00000511081	C1orf112	Q9NSG2	853 aa		13.63	□□□□□ -0.23
CLDND1-223	ENST00000511081	GINS2	Q9Y248	185 aa		13.63	□□□□□ -0.23
CLDND1-223	ENST00000511081	RWDD3	Q9Y3V2	267 aa		13.63	□□□□□ -0.23
CLDND1-223	ENST00000511081	PPME1	Q9Y570	386 aa		13.63	□□□□□ -0.23
CLDND1-223	ENST00000511081	TMEM150B	A6NC51	233 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	DDX11L8	A8MPP1	907 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	SLITRK3	O94933	977 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	BAG4	O95429	457 aa	Known RBP	13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	DARS	P14868	501 aa	Known RBP	13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	DRP2	Q13474	957 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	BTG3	Q14201	252 aa	Predicted RBP	13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	COL19A1	Q14993	1142 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	AAK1	Q2M2I8	961 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	NAALADL2	Q58DX5	795 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	BANK1	Q8NDB2	785 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	P2RX5	Q93086	422 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	HSD17B14	Q9BPX1	270 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	LMAN2L	Q9H0V9	348 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	AKT3	Q9Y243	479 aa		13.62	□□□□□ -0.23
CLDND1-223	ENST00000511081	WNT7A	O00755	349 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	DNM2	P50570	870 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	TFF2	Q03403	129 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	TRIM29	Q14134	588 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	PTPRO	Q16827	1216 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	MTERF2	Q49AM1	385 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	CCDC83	Q8IWF9	413 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	EXOC8	Q8IYI6	725 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	FBXO18	Q8NFZ0	1043 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	HLA-C	Q95604	372 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	JPH2	Q9BR39	696 aa	Predicted RBP	13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	DHX33	Q9H6R0	707 aa	Known RBP	13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	CYP26B1	Q9NR63	512 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	TMEM161A	Q9NX61	479 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	RGL1	Q9NZL6	768 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	PCDHA12	Q9UN75	941 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	PCDHB7	Q9Y5E2	793 aa		13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	MRPL42	Q9Y6G3	142 aa	Known RBP	13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.61	□□□□□ -0.23
CLDND1-223	ENST00000511081	DENND3	A2RUS2	1198 aa		13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081	LYPLA2	O95372	231 aa		13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081	NPEPPS	P55786	919 aa		13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081	HMGN5	P82970	282 aa	Known RBP	13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081	CAMK1	Q14012	370 aa		13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081	ZNF410	Q86VK4	478 aa		13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081	PPP1R16B	Q96T49	567 aa		13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081	SH2D3A	Q9BRG2	576 aa		13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081	TRAIP	Q9BWF2	469 aa		13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081	ZSWIM4	Q9H7M6	989 aa		13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081	PLAGL2	Q9UPG8	496 aa		13.6	□□□□□ -0.23
CLDND1-223	ENST00000511081		A0A0U1RQF3	1178 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	ZBTB39	O15060	712 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	GRM6	O15303	877 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	MARCH6	O60337	910 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	CTNNB1	P35222	781 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	SKIV2L	Q15477	1246 aa	Known RBP	13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	CALCRL	Q16602	461 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	FAM102B	Q5T8I3	360 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	OTUD6A	Q7L8S5	288 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	ZNF598	Q86UK7	904 aa	Known RBP	13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	SPPL3	Q8TCT6	385 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	DYDC2	Q96IM9	177 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	LXN	Q9BS40	222 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	FOXP1	Q9H334	677 aa	Predicted RBP	13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	TTC12	Q9H892	705 aa	Predicted RBP	13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	IFT122	Q9HBG6	1241 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	CHST12	Q9NRB3	414 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	RNF19A	Q9NV58	838 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081	LRFN2	Q9ULH4	789 aa		13.59	□□□□□ -0.23
CLDND1-223	ENST00000511081		A0A087WZ62	844 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	NEMF	O60524	1076 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	EOMES	O95936	686 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	XRCC6	P12956	609 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	ZSCAN20	P17040	1043 aa	Predicted RBP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	YWHAB	P31946	246 aa	Known RBP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	RFC5	P40937	340 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	GATM	P50440	423 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	ORC2	Q13416	577 aa	Predicted RBP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	RABEP1	Q15276	862 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	SAFB	Q15424	915 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	CTC1	Q2NKJ3	1217 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	TIGD5	Q53EQ6	642 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	PLA2G4F	Q68DD2	849 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	NCAPH2	Q6IBW4	605 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	ECHDC2	Q86YB7	292 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	C8orf76	Q96K31	380 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	ZNF668	Q96K58	619 aa	Predicted RBP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	CEP170P1	Q96L14	293 aa		13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	INO80B	Q9C086	356 aa	Predicted RBP	13.58	□□□□□ -0.24
CLDND1-223	ENST00000511081	TMEM60	Q9H2L4	133 aa		13.58	□□□□□ -0.24

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