RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 DAGLBQ8NCG7 672 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 RNF169Q8NCN4 708 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 TLE6Q9H808 572 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 PRKAG3Q9UGI9 489 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 DDX25Q9UHL0 483 aaKnown RBP17.32■□□□□ 0.36
TPM3-219ENST00000509409 CD207Q9UJ71 328 aa17.32■□□□□ 0.36
TPM3-219ENST00000509409 CCDC194A0A1B0GVG4 234 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 HOXA2O43364 376 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 MBTPS2O43462 519 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 MARCH6O60337 910 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 FGF18O76093 207 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 FGFR4P22455 802 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 GPC3P51654 580 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 CSPP1Q1MSJ5 1256 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 LETM2Q2VYF4 491 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 XKR3Q5GH77 459 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 ADHFE1Q8IWW8 467 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 FAM177A1Q8N128 213 aaPredicted RBP17.31■□□□□ 0.36
TPM3-219ENST00000509409 COLGALT1Q8NBJ5 622 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 TMEM117Q9H0C3 514 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 RALGAPA2Q2PPJ7 1873 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 NLRC5Q86WI3 1866 aa17.31■□□□□ 0.36
TPM3-219ENST00000509409 M0R2N6 131 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 DARSP14868 501 aaKnown RBP17.3■□□□□ 0.36
TPM3-219ENST00000509409 LAG3P18627 525 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 CDC42EP1Q00587 391 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 UBE3AQ05086 875 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 ZP2Q05996 745 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 SCRN1Q12765 414 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 SMAD4Q13485 552 aaKnown RBP17.3■□□□□ 0.36
TPM3-219ENST00000509409 MOXD1Q6UVY6 613 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 EFHBQ8N7U6 833 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 SH2D3AQ9BRG2 576 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 NIFKQ9BYG3 293 aaKnown RBP17.3■□□□□ 0.36
TPM3-219ENST00000509409 GCOM2Q9BZD3 368 aaPredicted RBP17.3■□□□□ 0.36
TPM3-219ENST00000509409 CWH43Q9H720 699 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 TLR9Q9NR96 1032 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 HCSTQ9UBK5 93 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 PUF60Q9UHX1 559 aaKnown RBP17.3■□□□□ 0.36
TPM3-219ENST00000509409 HCN4Q9Y3Q4 1203 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 PCDHGC5Q9Y5F6 944 aa17.3■□□□□ 0.36
TPM3-219ENST00000509409 TMEM150BA6NC51 233 aa17.29■□□□□ 0.36
TPM3-219ENST00000509409 PER2O15055 1255 aa17.29■□□□□ 0.36
TPM3-219ENST00000509409 TBX10O75333 385 aa17.29■□□□□ 0.36
TPM3-219ENST00000509409 CSDE1O75534 798 aaKnown RBP17.29■□□□□ 0.36
TPM3-219ENST00000509409 TARBP2Q15633 366 aaKnown RBP17.29■□□□□ 0.36
TPM3-219ENST00000509409 SMAD2Q15796 467 aaKnown RBP17.29■□□□□ 0.36
TPM3-219ENST00000509409 ECHDC2Q86YB7 292 aa17.29■□□□□ 0.36
TPM3-219ENST00000509409 ETNPPLQ8TBG4 499 aa17.29■□□□□ 0.36
TPM3-219ENST00000509409 FAM122AQ96E09 287 aa17.29■□□□□ 0.36
TPM3-219ENST00000509409 MBOAT7Q96N66 472 aa17.29■□□□□ 0.36
TPM3-219ENST00000509409 CASD1Q96PB1 797 aa17.29■□□□□ 0.36
TPM3-219ENST00000509409 SUCLA2Q9P2R7 463 aaPredicted RBP17.29■□□□□ 0.36
TPM3-219ENST00000509409 EVPLQ92817 2033 aa17.29■□□□□ 0.36
TPM3-219ENST00000509409 DCXO43602 365 aa17.28■□□□□ 0.36
TPM3-219ENST00000509409 DTNBO60941 627 aa17.28■□□□□ 0.36
TPM3-219ENST00000509409 ERVFC1P60507 584 aa17.28■□□□□ 0.36
TPM3-219ENST00000509409 PSMC5P62195 406 aa17.28■□□□□ 0.36
TPM3-219ENST00000509409 DRP2Q13474 957 aa17.28■□□□□ 0.36
TPM3-219ENST00000509409 NPY5RQ15761 445 aa17.28■□□□□ 0.36
TPM3-219ENST00000509409 POP1Q99575 1024 aaKnown RBP17.28■□□□□ 0.36
TPM3-219ENST00000509409 PHF20Q9BVI0 1012 aa17.28■□□□□ 0.36
TPM3-219ENST00000509409 C11orf16Q9NQ32 467 aa17.28■□□□□ 0.36
TPM3-219ENST00000509409 DACT1Q9NYF0 836 aa17.28■□□□□ 0.36
TPM3-219ENST00000509409 TPCN1Q9ULQ1 816 aa17.28■□□□□ 0.36
TPM3-219ENST00000509409 A0A087WZ62 844 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 C19orf67A6NJJ6 358 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 SLC37A4O43826 429 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 CCNT1O60563 726 aaKnown RBP17.27■□□□□ 0.36
TPM3-219ENST00000509409 PFKFB2O60825 505 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 DKC1O60832 514 aaKnown RBP eCLIP17.27■□□□□ 0.36
TPM3-219ENST00000509409 KRT17Q04695 432 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 ANKRD1Q15327 319 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 PLPP4Q5VZY2 271 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 PDE12Q6L8Q7 609 aaKnown RBP17.27■□□□□ 0.36
TPM3-219ENST00000509409 KCNT2Q6UVM3 1135 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 B3GNT9Q6UX72 402 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 LRRC55Q6ZSA7 311 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 PIK3AP1Q6ZUJ8 805 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 NEK8Q86SG6 692 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 RHPN2Q8IUC4 686 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 MRPS27Q92552 414 aaKnown RBP17.27■□□□□ 0.36
TPM3-219ENST00000509409 FAM20AQ96MK3 541 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 ZNF558Q96NG5 402 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 JPH2Q9BR39 696 aaPredicted RBP17.27■□□□□ 0.36
TPM3-219ENST00000509409 FDXACB1Q9BRP7 624 aaPredicted RBP17.27■□□□□ 0.36
TPM3-219ENST00000509409 INO80BQ9C086 356 aaPredicted RBP17.27■□□□□ 0.36
TPM3-219ENST00000509409 CLEC1BQ9P126 229 aa17.27■□□□□ 0.36
TPM3-219ENST00000509409 ORC3Q9UBD5 711 aaPredicted RBP17.27■□□□□ 0.36
TPM3-219ENST00000509409 BARX2Q9UMQ3 279 aaPredicted RBP17.27■□□□□ 0.36
TPM3-219ENST00000509409 LOXHD1Q8IVV2 1947 aa17.27■□□□□ 0.35
TPM3-219ENST00000509409 MYH9P35579 1960 aaKnown RBP17.26■□□□□ 0.35
TPM3-219ENST00000509409 A0A0U1RQF3 1178 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 EML1O00423 815 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 MAFO75444 373 aaPredicted RBP17.26■□□□□ 0.35
TPM3-219ENST00000509409 STBD1O95210 358 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 EOMESO95936 686 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 QARSP47897 775 aaKnown RBP17.26■□□□□ 0.35
TPM3-219ENST00000509409 LRRC43Q8N309 656 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 HELQQ8TDG4 1101 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms