RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 OTUD6AQ7L8S5 288 aa12.65□□□□□ -0.38
SIL1-212ENST00000509400 PDILTQ8N807 584 aa12.65□□□□□ -0.38
SIL1-212ENST00000509400 FAM122AQ96E09 287 aa12.65□□□□□ -0.38
SIL1-212ENST00000509400 CALML4Q96GE6 196 aa12.65□□□□□ -0.38
SIL1-212ENST00000509400 BMP2KQ9NSY1 1161 aaPredicted RBP12.65□□□□□ -0.38
SIL1-212ENST00000509400 DNM3Q9UQ16 869 aa12.65□□□□□ -0.38
SIL1-212ENST00000509400 MBLAC1A4D2B0 266 aaPredicted RBP12.64□□□□□ -0.39
SIL1-212ENST00000509400 EYA4O95677 639 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 GNAT1P11488 350 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 CMA1P23946 247 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 DRP2Q13474 957 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 DHX8Q14562 1220 aaKnown RBP12.64□□□□□ -0.39
SIL1-212ENST00000509400 TRIM71Q2Q1W2 868 aaKnown RBP12.64□□□□□ -0.39
SIL1-212ENST00000509400 NAALADL2Q58DX5 795 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 RRAGBQ5VZM2 374 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 LRRC71Q8N4P6 559 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 FSIP1Q8NA03 581 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 CDK5RAP3Q96JB5 506 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 SEZ6LQ9BYH1 1024 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 BHMT2Q9H2M3 363 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 GOLPH3LQ9H4A5 285 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 EPHX3Q9H6B9 360 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 SUGCTQ9HAC7 445 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 XPNPEP1Q9NQW7 623 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 TUBE1Q9UJT0 475 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 MTCH2Q9Y6C9 303 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 SLC4A7Q9Y6M7 1214 aa12.64□□□□□ -0.39
SIL1-212ENST00000509400 SLC26A4O43511 780 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 MAFO75444 373 aaPredicted RBP12.63□□□□□ -0.39
SIL1-212ENST00000509400 PLA2G4BP0C869 781 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
SIL1-212ENST00000509400 CLCN3P51790 818 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 MCM6Q14566 821 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 EFCAB12Q6NXP0 572 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 PADI6Q6TGC4 694 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 CLEC17AQ6ZS10 378 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 MAEAQ7L5Y9 396 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 SPRED2Q7Z698 418 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 SERINC5Q86VE9 423 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 KIAA0319LQ8IZA0 1049 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 METTL13Q8N6R0 699 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 LINC01465Q8N7H1 131 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 RASSF8Q8NHQ8 419 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 DNAJB3Q8WWF6 145 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 RAD54LQ92698 747 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.39
SIL1-212ENST00000509400 TMEM143Q96AN5 459 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 DHX58Q96C10 678 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 RUSC1Q9BVN2 902 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 NT5C3AQ9H0P0 336 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 FAM49AQ9H0Q0 323 aaPredicted RBP12.63□□□□□ -0.39
SIL1-212ENST00000509400 MTIF3Q9H2K0 278 aaKnown RBP12.63□□□□□ -0.39
SIL1-212ENST00000509400 DHX33Q9H6R0 707 aaKnown RBP12.63□□□□□ -0.39
SIL1-212ENST00000509400 CERS4Q9HA82 394 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 CCDC39Q9UFE4 941 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 DBR1Q9UK59 544 aaKnown RBP12.63□□□□□ -0.39
SIL1-212ENST00000509400 PCDHA2Q9Y5H9 948 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 PCDHA11Q9Y5I1 949 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 SCN10AQ9Y5Y9 1956 aa12.63□□□□□ -0.39
SIL1-212ENST00000509400 KDM3AQ9Y4C1 1321 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 COL1A2P08123 1366 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 IGKV6-21A0A0C4DH24 114 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 NPHP3-ACAD11A0A0J9YXS1 232 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 A0A1W2PQ27 194 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 A0A1W2PQ64 194 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 A0A1W2PQD8 194 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 ARHGEF35A5YM69 484 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 ZBBXA8MT70 800 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 MAGEB2O15479 319 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 POLR2DO15514 142 aaKnown RBP12.62□□□□□ -0.39
SIL1-212ENST00000509400 USO1O60763 962 aaKnown RBP12.62□□□□□ -0.39
SIL1-212ENST00000509400 PRPF40AO75400 957 aaKnown RBP12.62□□□□□ -0.39
SIL1-212ENST00000509400 SSBP05455 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
SIL1-212ENST00000509400 CA3P07451 260 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 PFKFB1P16118 471 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 ATP2A2P16615 1042 aaKnown RBP12.62□□□□□ -0.39
SIL1-212ENST00000509400 NDUFA8P51970 172 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 SLC12A3P55017 1021 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 TBC1D8BQ0IIM8 1120 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 TMEM62Q0P6H9 643 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 PTK7Q13308 1070 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 E2F4Q16254 413 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 SYT2Q8N9I0 419 aaPredicted RBP12.62□□□□□ -0.39
SIL1-212ENST00000509400 TMEM87AQ8NBN3 555 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 STAMQ92783 540 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 ZNF668Q96K58 619 aaPredicted RBP12.62□□□□□ -0.39
SIL1-212ENST00000509400 PPP1R16BQ96T49 567 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 OSBPL7Q9BZF2 842 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 GPRC5CQ9NQ84 441 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 FAM13BQ9NYF5 915 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 KCNH3Q9ULD8 1083 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 NOD1Q9Y239 953 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 HPSEQ9Y251 543 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 TET1Q8NFU7 2136 aa12.62□□□□□ -0.39
SIL1-212ENST00000509400 PTPRSQ13332 1948 aa12.61□□□□□ -0.39
SIL1-212ENST00000509400 FAM237AA0A1B0GTK4 181 aa12.61□□□□□ -0.39
SIL1-212ENST00000509400 SMIM35A0A1B0GVV1 85 aa12.61□□□□□ -0.39
SIL1-212ENST00000509400 VTNP04004 478 aa12.61□□□□□ -0.39
SIL1-212ENST00000509400 CYP11B2P19099 503 aa12.61□□□□□ -0.39
SIL1-212ENST00000509400 POU3F3P20264 500 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms