RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 SSRP1Q08945 709 aaKnown RBP16.43■□□□□ 0.22
HMGCL-208ENST00000509389 RESTQ13127 1097 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 ADAM15Q13444 863 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 SLC24A5Q71RS6 500 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 ADGRD2Q7Z7M1 963 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 TRIM22Q8IYM9 498 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 POF1BQ8WVV4 589 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 WASF1Q92558 559 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 FAM122AQ96E09 287 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 CEP131Q9UPN4 1083 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 SAMM50Q9Y512 469 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 C19orf67A6NJJ6 358 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 TBKBP1A7MCY6 615 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 WDR64B1ANS9 1081 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 MAGEB2O15479 319 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 MBTPS2O43462 519 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 ALADP13716 330 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 CLCN3P51790 818 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 NFKBIBQ15653 356 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 FAM102BQ5T8I3 360 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 ADHFE1Q8IWW8 467 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 FAM177A1Q8N128 213 aaPredicted RBP16.42■□□□□ 0.22
HMGCL-208ENST00000509389 FAM167AQ96KS9 214 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 SH3GLB2Q9NR46 395 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 DISC1Q9NRI5 854 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
HMGCL-208ENST00000509389 HCN4Q9Y3Q4 1203 aa16.42■□□□□ 0.22
HMGCL-208ENST00000509389 VPS37CA5D8V6 355 aaPredicted RBP16.41■□□□□ 0.22
HMGCL-208ENST00000509389 ZNF862O60290 1169 aa16.41■□□□□ 0.22
HMGCL-208ENST00000509389 USP11P51784 963 aa16.41■□□□□ 0.22
HMGCL-208ENST00000509389 NLRP5P59047 1200 aa16.41■□□□□ 0.22
HMGCL-208ENST00000509389 FAM189BP81408 668 aa16.41■□□□□ 0.22
HMGCL-208ENST00000509389 DSC3Q14574 896 aa16.41■□□□□ 0.22
HMGCL-208ENST00000509389 SMAD2Q15796 467 aaKnown RBP16.41■□□□□ 0.22
HMGCL-208ENST00000509389 SPOUT1Q5T280 376 aaKnown RBP16.41■□□□□ 0.22
HMGCL-208ENST00000509389 EFCAB12Q6NXP0 572 aa16.41■□□□□ 0.22
HMGCL-208ENST00000509389 LINC01465Q8N7H1 131 aa16.41■□□□□ 0.22
HMGCL-208ENST00000509389 PPP2R3CQ969Q6 453 aa16.41■□□□□ 0.22
HMGCL-208ENST00000509389 AIFM3Q96NN9 605 aa16.41■□□□□ 0.22
HMGCL-208ENST00000509389 GBP4Q96PP9 640 aa16.41■□□□□ 0.22
HMGCL-208ENST00000509389 CD207Q9UJ71 328 aa16.41■□□□□ 0.22
HMGCL-208ENST00000509389 GAS7O60861 476 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 OATP04181 439 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 MCM4P33991 863 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 NLRP11P59045 1033 aaKnown RBP16.4■□□□□ 0.22
HMGCL-208ENST00000509389 SMAD4Q13485 552 aaKnown RBP16.4■□□□□ 0.22
HMGCL-208ENST00000509389 UGCGQ16739 394 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 LRRC71Q8N4P6 559 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 EFHBQ8N7U6 833 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 SLC5A5Q92911 643 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 C8orf76Q96K31 380 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 RIT2Q99578 217 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 ADAMTS10Q9H324 1103 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 UNC45AQ9H3U1 944 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 ZSCAN16Q9H4T2 348 aaPredicted RBP16.4■□□□□ 0.22
HMGCL-208ENST00000509389 ATP6V0A4Q9HBG4 840 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 AAASQ9NRG9 546 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 NRBP2Q9NSY0 501 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 TYW1Q9NV66 732 aaKnown RBP16.4■□□□□ 0.22
HMGCL-208ENST00000509389 TMEM161AQ9NX61 479 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 HCSTQ9UBK5 93 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 AKT3Q9Y243 479 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 ARIH1Q9Y4X5 557 aaPredicted RBP16.4■□□□□ 0.22
HMGCL-208ENST00000509389 PCDHB12Q9Y5F1 795 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 PCDHGC5Q9Y5F6 944 aa16.4■□□□□ 0.22
HMGCL-208ENST00000509389 PRR33A8MZF0 331 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 DCXO43602 365 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 CHMP2AO43633 222 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 FGFR1P11362 822 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 TMOD1P28289 359 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 NRIP1P48552 1158 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 NDUFV1P49821 464 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 PRKCEQ02156 737 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 LRCH2Q5VUJ6 765 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 RBM23Q86U06 439 aaKnown RBP16.39■□□□□ 0.21
HMGCL-208ENST00000509389 TMEM87AQ8NBN3 555 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 TBCKQ8TEA7 893 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 GJA10Q969M2 543 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 MSLNLQ96KJ4 702 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 MAP7D2Q96T17 732 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 TEKT3Q9BXF9 490 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 CWH43Q9H720 699 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 ELAC1Q9H777 363 aaKnown RBP16.39■□□□□ 0.21
HMGCL-208ENST00000509389 CLEC1BQ9P126 229 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 PCDHA4Q9UN74 947 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 ATP6V1DQ9Y5K8 247 aa16.39■□□□□ 0.21
HMGCL-208ENST00000509389 FGF18O76093 207 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 SFNP31947 248 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 JAK3P52333 1124 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 UBE3AQ05086 875 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 Q4G0T1 1027 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 COLGALT1Q8NBJ5 622 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 ZNF668Q96K58 619 aaPredicted RBP16.38■□□□□ 0.21
HMGCL-208ENST00000509389 C5orf42Q9H799 3197 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 H3BQV1 296 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 PSMD10O75832 226 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 TDP2O95551 362 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 EYA4O95677 639 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 GLP2RO95838 553 aa16.38■□□□□ 0.21
HMGCL-208ENST00000509389 EIF4BP23588 611 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms